Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1245 ATGCCTCTGCCTGAACGCACGTACAGACATGTTGATACTTCAAGAAATTCAACCCCCGTGGCCAGCGTGGAACAATTCCTTCGAGGAGTGGATACTACAAGGAAGTCACCAACCTACTCTCCCACCTCGTCTACCCCTTTCTCTCCTTACTTTGAGAGGATGAAGAACCAAGACCCTGAAGAAGACCATGTGTATGAATCGGAGCTGGCACCTGAAGGATACAAAGAAAATGCAAGGCAACATCCAAGAGCAAATCCAGTAATCTCTGAGAATCATGTTCTGCACAACTCTGTCAAATTAGGAGTGATGAAAAATCGAGAAAAGTCACCAAACATGACACAACCAAATGCAGCAGCCAATTCTATATCCTCCAACAAAACTCAAGCTGCTGTGACCAACAACATTATGTCCTTACAAACTTCATCACTTCCATCATCTCCAATGCAAAACTCATTACTGAGTGGGAACAATAAGTACCAAAAGAGTCTTTCTCTCAAAAATCATTTGAACAATTCTGAACAAGGTGATGATGCCTCCGCCAGAAATGTGTCTCCGTCGATGCAAAAATCATCATCAATGAGTGGGAAGAACATTACAAGCCTAAAGAGTGCTTCAGTCAAAGATTATATAATAAACAAGTCTGAGCTAAGGGATGATGCCAAAACTGTGTCTCATGAGGTGATAACTGAAGCAACGAGTCCTAAAAAAACTTCTAGTAATGCAAGTGTGATTGAAAAGGTGAGAGGAGCTGTAAATTCACTGCTGGGCAATGAGGAACCATCACAACAATATAGTATCAAAACTCCTACTGCACGCACTTCCTCGCAAACTCAACAAGTTGATCAGGAAGAGAATTGCGGGAGAATTCTACAGGCAAATTAG 882 0.4206 MPLPERTYRHVDTSRNSTPVASVEQFLRGVDTTRKSPTYSPTSSTPFSPYFERMKNQDPEEDHVYESELAPEGYKENARQHPRANPVISENHVLHNSVKLGVMKNREKSPNMTQPNAAANSISSNKTQAAVTNNIMSLQTSSLPSSPMQNSLLSGNNKYQKSLSLKNHLNNSEQGDDASARNVSPSMQKSSSMSGKNITSLKSASVKDYIINKSELRDDAKTVSHEVITEATSPKKTSSNASVIEKVRGAVNSLLGNEEPSQQYSIKTPTARTSSQTQQVDQEENCGRILQAN 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1245 293 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 117 293 IPR037491 GO:0009737
Aed1g1245 293 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 16 63 IPR037491 GO:0009737
Aed1g1245 293 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 64 109 IPR037491 GO:0009737
Aed1g1245 293 PANTHER EUKARYOTIC RNA POLYMERASE II HEPTAPEPTIDE REPEAT 117 293 - -
Aed1g1245 293 PANTHER EUKARYOTIC RNA POLYMERASE II HEPTAPEPTIDE REPEAT 16 63 - -
Aed1g1245 293 MobiDBLite consensus disorder prediction 169 199 - -
Aed1g1245 293 MobiDBLite consensus disorder prediction 254 293 - -
Aed1g1245 293 MobiDBLite consensus disorder prediction 107 125 - -
Aed1g1245 293 MobiDBLite consensus disorder prediction 255 293 - -
Aed1g1245 293 MobiDBLite consensus disorder prediction 106 125 - -
Aed1g1245 293 MobiDBLite consensus disorder prediction 28 51 - -
Aed1g1245 293 PANTHER EUKARYOTIC RNA POLYMERASE II HEPTAPEPTIDE REPEAT 64 109 - -
Aed1g1245 293 MobiDBLite consensus disorder prediction 28 53 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1245 - - gsj:114388056 292.737
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1245 1 11865874 11867579 Aed5g0374 5 2657629 2660473 PCT