Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1190 ATGGAAAATCCCTCGGGTTCCATATTCAATTATCACGAGAGTTGTGATGAGTTGAGGCAAAAGCTTTTGGCCACCACGCTGGAACTGGAGAACATGAACAACGTGAGGAGGGAACTGCTGAATCTGCTGAAGTTGATATCCCAAGAGAGAGACGAAGCAAGACAAGAGCTTCAGAACCTGGTCACGAAACTAACATCCCCCACTATGTTTGAAGTAGTCCCTTCGAATATGATGATGACCAAAGCAAACTCGAGCATCACAGAATCCAACAGCACCTCGCACGTTTCCTCCTCCGTAGATTCTCTTCTGGAGGCAGTTTCTCCTCCTGCGGAATTCTCCAACAACATTAACGGTAACAATGTCGAGTCCCACATTAATAACCACAACAACTTTGGTTATCTGATCAAACAAAAGCAAAAGCGGACGTGTGATGCTGGGGACCAAATGATTGAATCCCTCCTTAAGGGAAAAGTGTTGCCTCAAAGGGGTAATCTCCTTAAGGCTGTGATGGATTCGGGTCCTTTGCTTCAGACACTACTTGTTGCGGGGCCACTTCCCACGTGGCGAAACCCCCCTCCTTTGCAGAACATTAAGATTCCACCTCTCGATGTGAAACCAAAACCAATGCTTGATCCTACTATGCTCAATGTTTCTGTTGTCACCAATTCATTCCAGATGAATTCAAATGCTACTACTTCTTGCAAGAACCTCGCCCCATCCTCCATGATTCCACAAAGCCATCACTATCTTCTACCAAATTGA 762 0.4567 MENPSGSIFNYHESCDELRQKLLATTLELENMNNVRRELLNLLKLISQERDEARQELQNLVTKLTSPTMFEVVPSNMMMTKANSSITESNSTSHVSSSVDSLLEAVSPPAEFSNNINGNNVESHINNHNNFGYLIKQKQKRTCDAGDQMIESLLKGKVLPQRGNLLKAVMDSGPLLQTLLVAGPLPTWRNPPPLQNIKIPPLDVKPKPMLDPTMLNVSVVTNSFQMNSNATTSCKNLAPSSMIPQSHHYLLPN 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1190 253 PANTHER HIGH MOBILITY GROUP BOX PROTEIN, PUTATIVE (DUF1635)-RELATED 1 236 - -
Aed1g1190 253 Coils Coil 15 63 - -
Aed1g1190 253 PANTHER ENABLED-LIKE PROTEIN (DUF1635) 1 236 IPR012862 -
Aed1g1190 253 Pfam Protein of unknown function (DUF1635) 13 226 IPR012862 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1190 Aed-Chr1 11525902 11527939 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1190 - - gmx:100788888 308.145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1190 1 11525902 11527939 Aed1g1190 1 11525902 11527939 ECH
Aed1g1190 1 11525902 11527939 Aed5g0429 5 3028172 3030423 PCT