Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1170 ATGATACGAGAAACGTCCCACATAGACGCCGTCATCCTCACCCTCTTCCAGGTCACAGTCTTTGACTTGACGATTTCTCACGTGAAGTTCCGTTTGAAACAGAACACACCAGAAGAAGGCCAAGGCCGGCCGGCACACACTTTCCACTCTTCCATCACGCGGATCGCACCGCGAAAACGACACCGTTTCACTAATCGCGATTTAGAAAGTGGAACAGCAATGGAGGCACTGCAGAGAAGAGTAGGAGGAGGAATGGTGCCGTTATCGCCGTCGCAGACTCCTCGCTCCAGCGATAAGCCGGTGCGAGATCTGCGATCTGCGGATTCGAATTCGAATTCCAACAGTCACAGCAAGTATGACAAGGACAAAGGCGTCAATGTGCAGGTCCTCGTGAGGTGTAGGCCGTTGAGCGAAGATGAAATGAGGCTGCACACGCCGGTTGTAATTTCGTGCCACGAAGGTAGAAGAGAGGTTTTAGCTGTTCAGAGTATCGCCAACAAACAGATCGATAGAACCTTTGCATTTGACAAGGTGTTTGGTCCTAACTCTCAACAGAGAGAATTGTATGATCAGGCAGTGTCTCCTATTGTGTACGAAGTGCTTGAGGGCTATAACTGCACTATTTTTGCGTATGGACAGACCGGGACAGGGAAGACATACACAATGGAAGGAGGTGCAATAAAGAAGAATGGCGAATTTCCAAGTGATGCTGGTGTCATCCCAAGAGCTGTGAAGCAGATTTTTGATATATTGGAAGCTCAGAATGCTGAGTATAACATGAAAGTAACGTTTCTAGAGCTTTACAATGAGGAAATAACAGATCTTTTGGCCCCTGAGGAGACTTCGAAATTTATAGATGATAAGTCTAGGAAACCTATTGCTCTAATGGAGGATGGGAAGGGGGGTGTTTTTGTCAGGGGTTTGGAAGAAGAGATTGTTTGCACTGCAAATGAAATTTACAAGATATTAGAAAAAGGTTCTGCAAAGAGGCGTACAGCTGAGACTCTTCTTAACAAACAAAGTAGTCGTTCTCACTCCATATTTTCTATCACAATTCACATTAAGGAATGCACTCCAGAGGGTGAGGAAATGATTAAATGTGGGAAGCTAAATCTTGTGGACCTCGCAGGCTCTGAGAATATTTCACGTTCCGGTGCAAGAGAGGGTAGAGCAAGGGAGGCTGGGGAGATAAACAAAAGCTTGCTTACACTTGGACGAGTGATTAATGCTCTAGTTGAGCACTCAGGTCATGTTCCATATAGGGATAGCAAATTAACAAGATTGTTGAGGGATTCTTTGGGTGGTAAAACCAAGACGTGCATTATTGCCACAATATCCCCCTCCATTCACTGTCTGGAAGAAACCCTTAGTACCTTGGATTATGCACACCGTGCCAAAAATATCAAGAACAAACCAGAGATTAATCAGAAAATGATGAAATCTGCAATGATTAAGGATTTGTATGGTGAAATTGACAGACTAAAGCAAGAGGTGTATGCAGCAAGAGAGAAGAATGGAATCTATATACCACGTGATCGCTACCTTCACGAAGAAGCAGAGAAGAAGGCCATGACTGAAAAGATAGAACGCATGGAACTAGAAGCAGAGTCTAAGGATAAACAACTGATGGAGCTTCAGGACCTTAATAATTCTCAGCAACTTTTGACTGATGAATTAAGTGTTAAACTTGAAAAAACTGAGAAAAGTCTAGAAGAAACTGAGCAGTCATTGTTTGATCTTGAGGAAAGGCACAAACAAGCAAATGCAACAATTAAGGAAAAGGAGTTTTTGATATCAAATCTCCTAAGATCTGAGAAAGCACTTGTGGAGCGTGCAATTGAACTGCGAGCAGAGCTTGAGAATGCTGCATCGGATGTGTCAAACCTCTTTTCTAAAATTGAGCGGAAGGATAAAATTGAAGAAGAAAACAGAATACTTATCCAGAAATTCCAGTCTCAGTTAGCTCAACAACTTGAAGTTTTGCACAAGACAGTTTCAGCTTCAGTGATGCATCAAGAGCAGCAACTGAAGGACATGGAGGAAGATATGCAGTCTTTTGTATCAACAAAAGCCGAGGCTACTGAAGATCTTAGAGAACGGGTAGGAAAGCTGAAAAATATGTATGGTTCTGGTATCAAAGCTCTGGATGATTTAGCTGAGGAGCTTAAAGGAAATAATCAGTTAACTTATGATGACCTGAAATCTGAAGTAGCCAAGCATTCATCTGCCTTGGAGGATCTATTTAAAGGAATCGCCTTAGAAGCTGATTCGTTACTAAATGATCTTCAAAGTAATCTCCACAAGCAAGAGGCCAATTTAACAGCTTATGCTCATCAACAAAGAGAGGCACATGCCAGAGCAGTGGAGACTACACGGGCAGTATCTAAAATAACAGTGAACTTTTTTGAGACAATAGACAGGCATGCATCCAGTCTGACCCATATTGTGGATGAAGCACAGTTGGTCAATGATCAGAAATTGTGTGAACTTGAGAAGAAGTTTGAGGAGTGTACTGCCTATGAAGAAAAACAACTACTGGAGAAAGTGGCAGAAATGCTAGCAAGTTCAAATGCTAGAAAGAAACAATTGGTTCAAATGGCAGTCAATGATCTTCGAGAAAGTGCAAACTGTAGAACCAGTAAACTGCGGCAAGAAGCATTAACCATGCAAGATTCCACTTCTTCTGTCAAGGCAGAATGGAGAGTTCACATGGAAAAAACAGAATCCAACTATCACGAGGATACTTCTGCTGTAGAATCTGGGAAGAAAGACCTTGTGGAGGTCCTTCAAATCTGCCTCAACAAGGCAAAAGTAGGTTCACAACAATGGAGAAAAGCTCAAGAGTCTTTGCTTAGTTTAGAGAAGAGAAATGCTGCTTCTGTGGATACTATTGTCAGGGGAGGAATGGAAGCTAATCAAGCTCTTCGTGCCCATTTCTCAAATGCTGTGTCGACTACACTTGAAGATGCAGGAATAGCAAACAAGGATATTAACTCATCTATTGATAATTCGTTGCAACTTGATCACGAAGCTTGTGGGAATCTGAACTCTATGATTATTCCATGCTGTGGTGATTTAAGAGAACTGAAGGGTGGTCATTACCATAGAATCGTAGAGATAACTGGAAATGCAGGGAATTGTCTTCTCAACGAATACATGGTCGACGAACCATCTTGTTCAACACCAAGAAAGAGACTCTTCAATTTACCTAGTGTTTCATCCATAGAAGAACTAAGAAGCCCATCATTTGAGGAATTGTTGAGGTCATTCTGGGATGCAAGATCTCCAAAACAAGCAAATGGAGATGTTAAACATATCGGGGCATACGAAGAGTCTCTTTCAGTGAGAGACTCCAGAGTTCCTCTTACTGCTATTAACTAG 3381 0.4227 MIRETSHIDAVILTLFQVTVFDLTISHVKFRLKQNTPEEGQGRPAHTFHSSITRIAPRKRHRFTNRDLESGTAMEALQRRVGGGMVPLSPSQTPRSSDKPVRDLRSADSNSNSNSHSKYDKDKGVNVQVLVRCRPLSEDEMRLHTPVVISCHEGRREVLAVQSIANKQIDRTFAFDKVFGPNSQQRELYDQAVSPIVYEVLEGYNCTIFAYGQTGTGKTYTMEGGAIKKNGEFPSDAGVIPRAVKQIFDILEAQNAEYNMKVTFLELYNEEITDLLAPEETSKFIDDKSRKPIALMEDGKGGVFVRGLEEEIVCTANEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVEHSGHVPYRDSKLTRLLRDSLGGKTKTCIIATISPSIHCLEETLSTLDYAHRAKNIKNKPEINQKMMKSAMIKDLYGEIDRLKQEVYAAREKNGIYIPRDRYLHEEAEKKAMTEKIERMELEAESKDKQLMELQDLNNSQQLLTDELSVKLEKTEKSLEETEQSLFDLEERHKQANATIKEKEFLISNLLRSEKALVERAIELRAELENAASDVSNLFSKIERKDKIEEENRILIQKFQSQLAQQLEVLHKTVSASVMHQEQQLKDMEEDMQSFVSTKAEATEDLRERVGKLKNMYGSGIKALDDLAEELKGNNQLTYDDLKSEVAKHSSALEDLFKGIALEADSLLNDLQSNLHKQEANLTAYAHQQREAHARAVETTRAVSKITVNFFETIDRHASSLTHIVDEAQLVNDQKLCELEKKFEECTAYEEKQLLEKVAEMLASSNARKKQLVQMAVNDLRESANCRTSKLRQEALTMQDSTSSVKAEWRVHMEKTESNYHEDTSAVESGKKDLVEVLQICLNKAKVGSQQWRKAQESLLSLEKRNAASVDTIVRGGMEANQALRAHFSNAVSTTLEDAGIANKDINSSIDNSLQLDHEACGNLNSMIIPCCGDLRELKGGHYHRIVEITGNAGNCLLNEYMVDEPSCSTPRKRLFNLPSVSSIEELRSPSFEELLRSFWDARSPKQANGDVKHIGAYEESLSVRDSRVPLTAIN 1126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1170 1126 CDD KISc_BimC_Eg5 124 477 - -
Aed1g1170 1126 Coils Coil 514 548 - -
Aed1g1170 1126 MobiDBLite consensus disorder prediction 36 121 - -
Aed1g1170 1126 Coils Coil 602 636 - -
Aed1g1170 1126 Coils Coil 484 504 - -
Aed1g1170 1126 Coils Coil 752 779 - -
Aed1g1170 1126 Pfam Kinesin motor domain 132 468 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed1g1170 1126 PANTHER KINESIN-LIKE PROTEIN KIN-5D 74 1126 - -
Aed1g1170 1126 Coils Coil 676 696 - -
Aed1g1170 1126 SMART kinesin_4 124 476 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed1g1170 1126 ProSitePatterns Kinesin motor domain signature. 368 379 IPR019821 GO:0003777|GO:0005524|GO:0007018
Aed1g1170 1126 Gene3D Kinesin motor domain 122 508 IPR036961 -
Aed1g1170 1126 Coils Coil 556 590 - -
Aed1g1170 1126 PANTHER KINESIN-LIKE PROTEIN KIF11 74 1126 - -
Aed1g1170 1126 ProSiteProfiles Kinesin motor domain profile. 126 468 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed1g1170 1126 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 126 508 IPR027417 -
Aed1g1170 1126 PRINTS Kinesin heavy chain signature 369 387 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed1g1170 1126 PRINTS Kinesin heavy chain signature 203 224 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed1g1170 1126 PRINTS Kinesin heavy chain signature 335 352 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed1g1170 1126 PRINTS Kinesin heavy chain signature 418 439 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1170 Aed-Chr1 11406668 11413505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1170 126 498 Miscellaneous Gene Families AT5G06670 38.522 4.10e-64 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1170 K10398 - gmx:100818630 1927.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1170 1 11406668 11413505 Aed1g1170 1 11406668 11413505 ECH
Aed1g1170 1 11406668 11413505 Aed5g0455 5 3231470 3241766 PCT