Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1154 ATGGGCAATGCGAATGCCCTTCTTTCACGGCTAAATGGGAGGGAGCATTCAAGTAGCGAGCCCGTTTTACTTTCCTGGAATACAAGGCAGTGTTTAACCATGCAAACCCCAAAGACAAGAAGTGGTAGTAGCTCCTCTGAAGTGCCTCAGAAGGTGTCCCCTCGTGGTGGACGCCAACTCAGGCCTGCTACAGTACTAGACACTGCATCTTCATTAAACCAATCTAACAAAACATCAAAGGATAATAATAGAACTCCCAAACTCACCGACCGCAGATCACCCAGAAGCCCCGCTCCAGAGAGGAAGCGTCCTAGCAGAATATCTGAATTGGAATCTCAGATTTCTGAACTCAAAGAGGATTTGAAGGTGGTGAGGAACCAGCTTGGCGTGTCTGAATCATGCAAGAAGCAAGCTCAGCAAGATGCTGAAGAGTCCAAGAAGCAACTAGCTTCCCTATCCTTGAAACTTGAAGATTCTCAACAGCAATTTCTGAAGTTTTCTGCTACTGAACAAGCTCGTGTTGTTGAACTCCAGAAAACCATAGAAGAGCATGATAAGGCGTGGCAATCCGAGCTCAGGGCTGCGCAACAGAAGCTCTCAGACAACACTGCTGCTCTCACCTCGGCCATCGATGAAATTCAGCAGCTCAAGGTTCAACTTGAATTGGTAGCTAATTGTGAGAATGCACACACACAAATTGCGGAATCTTCAGACGTGGAGCTGCTAAACTTGAAGGATAACTTGGCAGAATCTCTTTCACTTGTGGAGAACATGAAAAACCAACTCAGGGATTCCAAAGAGTCAGCTCAGGCACAAGCTTTGGTCAACGAGACTTTGCGGCAACTTGAGGCTGCAAAAAGAACTGTTGAGTTCCTGAGAGCTGATGCTGCTAAAGCTGTGAATGGCTACAACTCTGCTGCTTTGGAGTTAGACCAATCTAGAGCACGTGTCAACTCACTAGAGGCACTAGTAAGCAAACTTGAGTTTGGCTTCATTAGTAACGAATGCAACCACTCTTTAAAACTTGCAGAAGATGGTAACATGGAGCTACAAAAGGGTGAGGATCCTAATCACATAGAAGCAGAAATTTGTTCTTTGAGGTCTGCCATAGAATCTGCCGAGACTAAGCACCAGGAAGAACAGATTCAGTGTTCAGTGAATATTAGGAAAGCCTATGAGTTGATTGAACAGATAAAAACAGAAGCAAACCAGAGGGAATCTGAGCTAGAGGGTGAATTGAGAAGAAAGAATGCTGATATTGAAGAGCTGAAGGCTAACCTAATGGACAAGGAAACTGAGTTGCAGGGCATTGTGGAGGAGAATGAGAAGCTGAGTTTGCAGCTTGAAAAAAGCATGTCATCACAGAGAGAACATGAACTTAAAAAGGAGCTTCGAAAGCTAGATGAATGTGTGGCTGGATTGAAAGGCGATCTGATGGACAAGGAAACAACATTGCAAAGCATATCTGAAGAGAATGAAATGCTCAAGTTGGAGATCAGTAAGAGGTTTGCACATGGTGGTAAGGTGATGCAGGAAGTTGCTGCAGAACTGGAGGCAGCTAAGGCTGCGGAACGCGAGGCGGTAATGAAACTTGCTATTGTGATGGAGAATTCAGATAGGAGCAACCGAAAGGCGGCGAGGGTGGCGGAGCAGTTGGAAGCATCTCAAGCAGCAAATTCAATAATAGAAGGTGAACTGAGAAGACTGAAGGTGCAGTCTGATCAATGGAGAAAGGCTGCAGAGGCAGCTGCTGCTATGCTCTCAGCAGCAGGGAACAATGGCAATGGGAAGCTCACTGAGAGGTCAATGTCTTTGGACAACAACTACAACTCTATAATTAACAAGTACTCGCCTTTTTGTGAAGAACTTGATGATGATGATGATTTCCAGACCAAGAAAAATGGCAACATGCTCAAGAAGATTGGGGTCTTGTGGAGGAAACCTCATAAATAG 1953 0.4516 MGNANALLSRLNGREHSSSEPVLLSWNTRQCLTMQTPKTRSGSSSSEVPQKVSPRGGRQLRPATVLDTASSLNQSNKTSKDNNRTPKLTDRRSPRSPAPERKRPSRISELESQISELKEDLKVVRNQLGVSESCKKQAQQDAEESKKQLASLSLKLEDSQQQFLKFSATEQARVVELQKTIEEHDKAWQSELRAAQQKLSDNTAALTSAIDEIQQLKVQLELVANCENAHTQIAESSDVELLNLKDNLAESLSLVENMKNQLRDSKESAQAQALVNETLRQLEAAKRTVEFLRADAAKAVNGYNSAALELDQSRARVNSLEALVSKLEFGFISNECNHSLKLAEDGNMELQKGEDPNHIEAEICSLRSAIESAETKHQEEQIQCSVNIRKAYELIEQIKTEANQRESELEGELRRKNADIEELKANLMDKETELQGIVEENEKLSLQLEKSMSSQREHELKKELRKLDECVAGLKGDLMDKETTLQSISEENEMLKLEISKRFAHGGKVMQEVAAELEAAKAAEREAVMKLAIVMENSDRSNRKAARVAEQLEASQAANSIIEGELRRLKVQSDQWRKAAEAAAAMLSAAGNNGNGKLTERSMSLDNNYNSIINKYSPFCEELDDDDDFQTKKNGNMLKKIGVLWRKPHK 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1154 650 Coils Coil 135 162 - -
Aed1g1154 650 Coils Coil 241 295 - -
Aed1g1154 650 MobiDBLite consensus disorder prediction 1 52 - -
Aed1g1154 650 Coils Coil 303 323 - -
Aed1g1154 650 Coils Coil 478 498 - -
Aed1g1154 650 Coils Coil 388 447 - -
Aed1g1154 650 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 3 34 650 - -
Aed1g1154 650 MobiDBLite consensus disorder prediction 83 109 - -
Aed1g1154 650 MobiDBLite consensus disorder prediction 64 82 - -
Aed1g1154 650 Coils Coil 107 127 - -
Aed1g1154 650 MobiDBLite consensus disorder prediction 1 109 - -
Aed1g1154 650 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 2, CHLOROPLASTIC-RELATED 34 650 IPR029688 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1154 Aed-Chr1 11254667 11259808 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1154 - - gmx:100809009 986.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1154 1 11254667 11259808 Aed1g1154 1 11254667 11259808 ECH
Aed1g1154 1 11254667 11259808 Aed5g0475 5 3454586 3460682 PCT