Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1142 ATGGCTAGAGGTTCCTCTCAGTCTCAGTCCTCCACTTCAACAGCCACGCGACCAGGACCAGGAGGCATAGCTCCGCGCGGTACCGCCGCCGCCACGGCCGGCATGCGCCGCCGCCGTCTCGGGGGAGGAAACAGCTCCGCCAGCAGCAGTGTCGGAGGCGGCGGCAGCAGCAACATGCTGAGGTTCTACACGGACGACGCGCCGGGGCTGAAGATTTCGCCGACGGTGGTGCTCGTGATGAGCCTCTGCTTCATCGGCTTCGTCACCGCCCTCCACGTGTTCGGCAAACTCTACCGCTCCAAATCTGGCGGCGCCGCTTGA 321 0.6573 MARGSSQSQSSTSTATRPGPGGIAPRGTAAATAGMRRRRLGGGNSSASSSVGGGGSSNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTALHVFGKLYRSKSGGAA 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1142 106 MobiDBLite consensus disorder prediction 1 56 - -
Aed1g1142 106 PANTHER PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT BETA 1 105 - -
Aed1g1142 106 PIRSF Sec61_beta 11 103 IPR030671 GO:0005784|GO:0006886
Aed1g1142 106 Pfam Sec61beta family 56 95 IPR016482 -
Aed1g1142 106 PANTHER SEC61 SUBUNIT BETA 1 105 IPR030671 GO:0005784|GO:0006886
Aed1g1142 106 MobiDBLite consensus disorder prediction 42 56 - -
Aed1g1142 106 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1142 Aed-Chr1 11160429 11160749 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1142 K09481 - gmx:100814692 120.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1142 1 11160429 11160749 Aed5g0492 5 3603814 3604134 PCT