Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1089 ATGAAGCTCCTCCACAACCACAAACAAGGAAACAAGCCTCAACAAGACAAAAATAATTGCTTTCACACATATTACAAATGGGTTCTCTGGCTTTCTTTCTCCCTCTATTTCTTCACTTCCTACCTCATCAACAACACACCAGCAACCTCTGCAGACACATCCCATATTGTTGCAGTTTCTAACACTCTAGGGGTGCTGAAGAATTTGAAGGTGTTTGTATACGATCTTCCACCCAGTTACAACACCGATTGGCTAGCGAATGAAAGGTGTAGCAATCATTTATTCGCTTCGGAAGTGGCCATTCACAGGGCACTGTTAACAAGCGAGTTTCGCACGTTTGACCCCTACGACGCTGATTTCTTCTTCGTCCCGGTTTACGTTTCTTGCAACTTCAGCGCCGTCAACGGCTTCCCGGCGATCGGCCACGCGCGAGGTCTTATAACCTCCGCTGTCAACCTCATCTCCACGGAATACCCATTCTGGAACCGCAGCAGAGGATCCGACCACGTTTTCGTCGCTTCCCACGACTTCGGCGCATGCTTCCACACCCTGGAGGACGCGGCAATGGCTGATGGAATACCGAGAATTATGAAGAACTCGATTGTGTTGCAGACATTCGGCGTCATTCACCCGCATCCGTGTCAAGAGGTTGAGAATGTGGTCATACCGCCTTACGTTTCGCCGGAGAGTGTACGGAGCATGCTGGAGAAATTTCCGGTGAACGGACGGAGAGACATTAGGGCGTTTTTCCGAGGGAAAATGGAAGTCCATCCTAAAAATGTCAGAGGACGCTTTTACAGCAGGCGAGTGAGGACGGAGATTTGGCGGAAGTTCAACGGTGACCGGAGGTTTTACCTTCGGAGGCGTAGATTTGACGGTTACCAACTGGAGATAGCTCAGTCGATGTTTTGTTTGTGTCCATTGGGGTGGGCTCCGTGGAGTCCGAGGTTGGTGGAGTCGGTCGCCTTGGGGTGTGTGCCGGTTGTGATTGCGGATGGGATTCGGTTGCCGTTTTCATCGGCCGTGAGGTGGTCGGAGATATCGTTGACGGTGGCGGAGAAGGACGTGGGAAAGTTGGGGACGATTCTGGAGCGCGTGGCTGCGACGAACCTGAGTGTGATTCAGAGAAATCTGTGGGACCCGCGGACGAGGCGGGCCTTGCTTTTCAACGATGAGGTGCAGGAAGGGGACGCCACGTGGCAAGTTCTGGTTAGTTTGAGTGAGAAGCTGGGTAGGTCGTATCGGCGGTCATTGGATAGTGACACGTAA 1269 0.5201 MKLLHNHKQGNKPQQDKNNCFHTYYKWVLWLSFSLYFFTSYLINNTPATSADTSHIVAVSNTLGVLKNLKVFVYDLPPSYNTDWLANERCSNHLFASEVAIHRALLTSEFRTFDPYDADFFFVPVYVSCNFSAVNGFPAIGHARGLITSAVNLISTEYPFWNRSRGSDHVFVASHDFGACFHTLEDAAMADGIPRIMKNSIVLQTFGVIHPHPCQEVENVVIPPYVSPESVRSMLEKFPVNGRRDIRAFFRGKMEVHPKNVRGRFYSRRVRTEIWRKFNGDRRFYLRRRRFDGYQLEIAQSMFCLCPLGWAPWSPRLVESVALGCVPVVIADGIRLPFSSAVRWSEISLTVAEKDVGKLGTILERVAATNLSVIQRNLWDPRTRRALLFNDEVQEGDATWQVLVSLSEKLGRSYRRSLDSDT 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1089 422 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 18 419 IPR004263 GO:0006486|GO:0016757
Aed1g1089 422 PANTHER GLUCURONOSYLTRANSFERASE, PUTATIVE-RELATED 18 419 - -
Aed1g1089 422 Pfam Exostosin family 67 365 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1089 Aed-Chr1 10745183 10748801 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1089 K20889 - gmx:100807050 749.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1089 1 10745183 10748801 Aed1g1089 1 10745183 10748801 ECH
Aed1g1089 1 10745183 10748801 Aed5g0574 5 4189398 4192024 PCT