Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1034 ATGATTGAGGTTCACTTAGAAAACTTTTCTCCCTCTCCAAAATCTCCAATGGAATTGGGAAGCATAACACACTTTCTTCAAGATAAGACCATTTTAGTCACTGGTGCCACTGGCTTCCTCGCAAAAATTTTTGTGGAAAAAATATTGAGGGTTCAACCAAATGTGAAGAAACTTTATCTTCTTTTGAGAGCCAAAGATGCTGAATCCGCTGCTCAACGCTTGGACGCTGAGATCTTAGCGAAGGACTTATTTAGATTGCTGAAGGAAAAACTGGGCACAAGATTCAATTCCTTTGTCTCAGAAAAGTTGACTGTAGTGCCTGGAGACATTTCTCAAGAGGACTTGAATTTGAAGGACTCAATTCTAGGGGAAGAGATTTTCAATCAAACAGATGTTATAGTTAATTTAGCTGCAACAACTAACTTTGATGAAAGATACGATGTTGCATTGGGTATAAATACATTGGGAATTATGCATGTGTTGAACTTCGCCAAAAAATGTGTCAAACTAAAGGTGCTTGTCCACGTATCAACAGCTTACGTATGTGGAGAAAGAGGAGGACTCATACTAGAGGATCCACATCACTTTGGTGTGTCACTTAATGGAGTGCAGGGACTAGACATTGAAATGGAAAAGAAAAAGGTCGAGGAGAAATTGAACCAGCTTAGAGAAGAGGGGGCCACAGAACATGATATTGAATTGGCCATGAAGGACTTGGGTAGTGAAAGAGCAACGATGTATGGATGGCCAAACACGTACGTGTTTACAAAAGCAATGGGAGAAATGCTTGTAGGAACTACAAAGGGAAACATGAACGTAGTAATTGTACGTCCCACAATCATTACTAGCACTTTGAGAGAACCATTCCCTGGTTGGATCGAAGGTTTAAGAACCATAGACAGCTTAGTTGTTGCTTATGGTAAAGGAAAATTAACATGCTTCCTTGCGGATCTTAAGGCAGTTTTTGACGTGATACCGGCTGACATGGTGGTGAATGCAATGCTAGTGGGCATGGTGGCACATGCAAATCAACCTAATGATATGATATATCATGTGGGTTCCTCTGTTGTAAATCCGGTTAGGTACCTTAATTTTCGAGATTATTGCTTAAGATATTTCGCGGAAAAACCTTGGATAAACAAGGATGGAAAGCCCGTAAAGGTTGGCAAAATTACCATATTGAGCAACATGGATAGCTTCCGCAAATATATGTACATTCGTTTCCTGCTTCCCTTAAAGGGGCTAGAGCTGGTGAATGCAGCTTCGTGCCAGTATTTTCAGGAAATGTATCTCAACTTCAATCGGAAGATCCGTATTGTCATGCGATTGGTTGAACTTTACAAGCCTTACTTGTTCTTCAATGGGGTGTTTGATAATATGAATACAGAAAAGTTATTATCATCAGCAAGACAAGGTGGGGCAGAGATGGAATTGTTTTACTTTGACCCAAAAATTATTGATTGGGACGACTATTTCATGAATATCCATTTTCCTGGTGTCATCAAGTATGTCTTCAATTGA 1521 0.3984 MIEVHLENFSPSPKSPMELGSITHFLQDKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAKDAESAAQRLDAEILAKDLFRLLKEKLGTRFNSFVSEKLTVVPGDISQEDLNLKDSILGEEIFNQTDVIVNLAATTNFDERYDVALGINTLGIMHVLNFAKKCVKLKVLVHVSTAYVCGERGGLILEDPHHFGVSLNGVQGLDIEMEKKKVEEKLNQLREEGATEHDIELAMKDLGSERATMYGWPNTYVFTKAMGEMLVGTTKGNMNVVIVRPTIITSTLREPFPGWIEGLRTIDSLVVAYGKGKLTCFLADLKAVFDVIPADMVVNAMLVGMVAHANQPNDMIYHVGSSVVNPVRYLNFRDYCLRYFAEKPWINKDGKPVKVGKITILSNMDSFRKYMYIRFLLPLKGLELVNAASCQYFQEMYLNFNRKIRIVMRLVELYKPYLFFNGVFDNMNTEKLLSSARQGGAEMELFYFDPKIIDWDDYFMNIHFPGVIKYVFN 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1034 506 CDD FAR-N_SDR_e 29 377 - -
Aed1g1034 506 PANTHER MALE STERILITY PROTEIN 2-RELATED 18 505 IPR026055 GO:0080019
Aed1g1034 506 Gene3D - 5 391 - -
Aed1g1034 506 CDD FAR_C 406 505 IPR033640 -
Aed1g1034 506 Pfam Male sterility protein 33 334 IPR013120 -
Aed1g1034 506 Coils Coil 205 225 - -
Aed1g1034 506 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 29 373 IPR036291 -
Aed1g1034 506 PANTHER FATTY ACYL-COA REDUCTASE 18 505 - -
Aed1g1034 506 Pfam Male sterility protein 409 506 IPR033640 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1034 Aed-Chr1 10380728 10383816 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1034 126 505 Acyl Lipid Metabolism Gene Families AT4G33790 63.421 0.0 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1034 K13356 - gmx:100805240 880.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1034 1 10380728 10383816 Aed5g0637 5 4694948 4696180 PCT