Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1033 ATGGAGGTAGGAAGTGTTCTTGACTTTCTTCAGGACAAGACCATTTTAATTATTGGAGCCACTGGCTTTCTCGCCAAAATTTTTCTGGAGAAGATATTGAGGGTTCAACCAAACGTCAAGAAGCTTTTTCTTCTTTTAAGAGCTTCGGATGCCAAATCTGCTAATTATCGCTTGCAAAATGAGGTAATCATAGCGAAGGAGTTGTTTATTGTGCTAAAGGAAAAATTGGGTGCAAATTTTAAGTCCTTTATTTCGGAAAAAGTGACTCTGGTGCCCGGGGATATTTCTTACGAGGACTTGGGTTTGAAGGATTCCATTATGAGGGAAGAGATTTGCAATCAGACAGATGTTATTGTCAATTTAGCAGCAACTACTAACTTTGATGAAAGGTACGACATAGCGTTGGGTCTAAATACCTTTGGAGTTAAGCATGTCATGAACTTTGCTAAACAGTGTACCAAACTCAAAGTTCTTCTTCATGTATCAACAGCTTATGTATGTGGTGAGAAAGGTGGACTGATACTAGAGGACCCCTATCACTTTGGTGATTCACTAAATGGAGTATCTGGACTAGACATCGATGCAGAAAGGACAATAGTGTGTGACAAATTAGATGAATTACGAGTGCAAGGGGCCACAGAGCGTGATGTTAAAATAGCCATGAAGAACCTCGGTATTACCAGGTTTGTCATCAAAATCTACCATCATCATCGTATATAA 720 0.3931 MEVGSVLDFLQDKTILIIGATGFLAKIFLEKILRVQPNVKKLFLLLRASDAKSANYRLQNEVIIAKELFIVLKEKLGANFKSFISEKVTLVPGDISYEDLGLKDSIMREEICNQTDVIVNLAATTNFDERYDIALGLNTFGVKHVMNFAKQCTKLKVLLHVSTAYVCGEKGGLILEDPYHFGDSLNGVSGLDIDAERTIVCDKLDELRVQGATERDVKIAMKNLGITRFVIKIYHHHRI 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1033 239 PANTHER FATTY ACYL-COA REDUCTASE 2 230 - -
Aed1g1033 239 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 13 175 IPR036291 -
Aed1g1033 239 Gene3D - 8 199 - -
Aed1g1033 239 PANTHER MALE STERILITY PROTEIN 2-RELATED 2 230 IPR026055 GO:0080019
Aed1g1033 239 Pfam Male sterility protein 18 195 IPR013120 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1033 Aed-Chr1 10370991 10373183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1033 7 228 Acyl Lipid Metabolism Gene Families AT3G44540 55.157 8.99e-81 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1033 K13356 - gmx:100788680 418.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1033 1 10370991 10373183 Aed1g1033 1 10370991 10373183 ECH
Aed1g1033 1 10370991 10373183 Aed5g0639 5 4714112 4716405 PCT