Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0993 ATGACCACCAACACCAAGGATTGCGGCCACCACGACGAGGAGCACCGTCAGATCCTCCGCCGCGTGTTCGCGGCGATCCTCGGCTTAATCATCCTCATCCTCCTTGTGATATTCCTGATCTGGATAATCCTCCGCCCCACAAAACCCCGCTTCATCCTCCAAGACACCACCGTCTACGCCTTCAACCTCTCATCGAGCGGCGACATACCCTCCCCCACCGCACCCACCCCGAACACCCTCACCCTAACCATGCAGGTCACACTCGCCGCCTTCAACCCGAACCGCCGCATCGGCGTCTACTACACCAAACTCGACGCCTACGCCGTCTACCGCGGCCAGCAGGTCTCCCTCGCCACCTCCCTCCCCGCGACCTACCAGGGCCACCGCGACACCGCCGTTTGGTCGCCCTTCCTCTTCGGCTCCGCCGTCCCCGTCTCCCCCTTCATGCTCGAGATCCTCCAGCAGGACAAAACCTCCGGAGGAGTCCTGGTCAACGTCAAAGTCAGCGGAAGAGTCAAGTGGAAAGTCGGAACTTGGGTTTCCGGAAGGTACCATGTTAATGTCAACTGTCCCGCCTACATCAGACTCGCCGGCGACCGCGACGACGCCATCGGAGTTGCCGCTCCCGCCGTCAAGTTTCAGCTCTTTCAAACTTGCATTGTTGATGTCTAG 672 0.6042 MTTNTKDCGHHDEEHRQILRRVFAAILGLIILILLVIFLIWIILRPTKPRFILQDTTVYAFNLSSSGDIPSPTAPTPNTLTLTMQVTLAAFNPNRRIGVYYTKLDAYAVYRGQQVSLATSLPATYQGHRDTAVWSPFLFGSAVPVSPFMLEILQQDKTSGGVLVNVKVSGRVKWKVGTWVSGRYHVNVNCPAYIRLAGDRDDAIGVAAPAVKFQLFQTCIVDV 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0993 223 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 11 223 - -
Aed1g0993 223 Pfam Late embryogenesis abundant protein 87 190 IPR004864 -
Aed1g0993 223 PANTHER OS05G0367900 PROTEIN 11 223 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0993 Aed-Chr1 10151747 10152418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0993 16 190 EF-hand Containing Proteins AT5G21130 23.429 8.31e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0993 - - pvu:PHAVU_005G120900g 380.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0993 1 10151747 10152418 Aed1g0993 1 10151747 10152418 ECH
Aed1g0993 1 10151747 10152418 Aed5g0692 5 5067361 5068002 PCT