Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0965 ATGGAGTTTCATTTTCACCCAAAGCTCAACCATCTTTTATGCTTATTCATCCTCATCCTTTCATCTCTCCACGCTCAAGCTACTACCTTCAGATACTGCGCTGATGTAAACTATGCTGTGAAGGTATCTAGAGTTGAAATTAAACCAGAACCTGTTGTGCGTGCTAGCCCTGCTACCTTTAAGATTTCAGCTGCTACTGGGGAAGCTGTTTATGGAGGAAAGTGGGTAACTGCAGTTTCATACTTGGGCTTTGTTGTCCATAAAGAAATCCATGATTTTTGTGAGGAAATATCATGTCCTGTTGCTCCTGGCAGTTTTGTGGTTGCTCACACCCAAAATTTACCTGCATTTGCCCCACCAGGCACCTACGCCGTGGAGATGACACTGAAAAATGAGAAGAACGAGCCATTAACTTGCATCACCTTTAAATTCAAAATCGTTTTTGGATCTTCTGTGATATCTGAACTGAAGTGGCCATCGCTCTAA 486 0.4259 MEFHFHPKLNHLLCLFILILSSLHAQATTFRYCADVNYAVKVSRVEIKPEPVVRASPATFKISAATGEAVYGGKWVTAVSYLGFVVHKEIHDFCEEISCPVAPGSFVVAHTQNLPAFAPPGTYAVEMTLKNEKNEPLTCITFKFKIVFGSSVISELKWPSL 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0965 161 CDD PG-PI_TP 30 144 IPR033917 GO:0032366
Aed1g0965 161 PANTHER LEGUMINOSIN GROUP578 SECRETED PEPTIDE 8 151 - -
Aed1g0965 161 SMART pgtp_13 30 144 IPR003172 -
Aed1g0965 161 Gene3D - 28 149 - -
Aed1g0965 161 SUPERFAMILY E set domains 27 147 IPR014756 -
Aed1g0965 161 Pfam ML domain 28 146 IPR003172 -
Aed1g0965 161 PANTHER NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED 8 151 IPR039670 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0965 Aed-Chr1 9963928 9965914 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0965 - - gmx:100818265 258.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0965 1 9963928 9965914 Aed1g0965 1 9963928 9965914 ECH
Aed1g0965 1 9963928 9965914 Aed5g0714 5 5305658 5309371 PCT