Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0937 ATGACCTGGAAAAGCAGGGGAGAGTTGTTTCCTAAAAGTGTCATGTCTCAGAAATGGATGATTTTTCTCTGTATTGGAAGCTTCTGTGCTGGGATGTTTATCACCAACAGGATGTGGACGATTCCTGAACCTAAAGGACTTGCACGGACAACAGCCATGGAAGCTGAAAAATTGAATATAGTTTCAGAGGGTTGTAATTCGAGAATTTTGCTAGAGAAGGAAGTGAAGCGTGAAACTAAAGGAATCTATAGTGAGGTTCTCAAGACACAAAATGCCATACAGTACCTAATGGTCATAGGAGTTAACACTGCTTTCAGCAGCAGAAAAAGAAGGGACTCAGTTCGTGAGACATGGATGCCACAAGGTGAGAAAAGAAAGAAGCTAGAGGAAGAGAAGGGCATCATCATCCGATTTGTAATTGGTCATAGTGCTACATCAGGGGGTATCCTAGACAGAGCTATTGAAGCAGAAGGTAGGAAGCATGGAGATTTCCTAAGACTGGATCATGTTGAAGGATACCTTGAATTGTCAGCAAAGACAAAAACATACTTTGCCACTGCTGTTAACTTATGGGATGCTGACTTCTATATCAAAGTTGATGACGATGTTCATGTAAATATAGCGACACTGGGACAAACTCTAGTGAGACACCGATCAAAACCGCGGGTGTACATTGGATGCATGAAATCTGGGCCTGTTCTTTCTCAAAAAGGGGTAAGGTACCATGAACCAGAATACTGGAAATTTGGAGAGGCTGGAAACAAGTACTTCCGCCACGCCACGGGACAGTTATATGCCATTTCAAAAGATCTGGCTACATACATTTCAAATAACAAGCACGTTCTCCACAAGTATGCCAATGAGGATGTCTCACTAGATTGTGAATGGAAAGCACAGGCAGGGAACGTTTGTGTTGCTTCATTTGATTGGACGTGCAGTGGAATTTGCAGGTCTGCTGAAAGGATCAAAGAGGTTCACAAGAAATGTGGAGAAGGTGAGAAAGCCTTGTGGAATGCCTCTTTCTAA 1026 0.4269 MTWKSRGELFPKSVMSQKWMIFLCIGSFCAGMFITNRMWTIPEPKGLARTTAMEAEKLNIVSEGCNSRILLEKEVKRETKGIYSEVLKTQNAIQYLMVIGVNTAFSSRKRRDSVRETWMPQGEKRKKLEEEKGIIIRFVIGHSATSGGILDRAIEAEGRKHGDFLRLDHVEGYLELSAKTKTYFATAVNLWDADFYIKVDDDVHVNIATLGQTLVRHRSKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGEAGNKYFRHATGQLYAISKDLATYISNNKHVLHKYANEDVSLDCEWKAQAGNVCVASFDWTCSGICRSAERIKEVHKKCGEGEKALWNASF 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0937 341 Pfam Galactosyltransferase 109 292 IPR002659 GO:0006486|GO:0016020|GO:0016758
Aed1g0937 341 PANTHER HEXOSYLTRANSFERASE 94 292 - -
Aed1g0937 341 PANTHER HEXOSYLTRANSFERASE 293 333 - -
Aed1g0937 341 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 94 292 IPR002659 GO:0006486|GO:0016020|GO:0016758
Aed1g0937 341 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 8 96 IPR002659 GO:0006486|GO:0016020|GO:0016758
Aed1g0937 341 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 293 333 IPR002659 GO:0006486|GO:0016020|GO:0016758
Aed1g0937 341 Pfam Domain of unknown function (DUF4094) 16 96 IPR025298 -
Aed1g0937 341 Gene3D - 91 307 - -
Aed1g0937 341 PANTHER HEXOSYLTRANSFERASE 8 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0937 Aed-Chr1 9740496 9745545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0937 1 341 Glycosyltransferase AT1G05170 65.848 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0937 K20855 - gmx:100793931 646.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0937 1 9740496 9745545 Aed1g0937 1 9740496 9745545 ECH
Aed1g0937 1 9740496 9745545 Aed5g0739 5 5503517 5507618 PCT