Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0875 ATGGTCAACAGTGAGGTTTCTACACGTCTTGAGGGAAAATATGCTGCAGTTGTGGTCTGTTGGCTTCTTGGCAATGGATGTCTTTTCTCATGGAACAGTATGCTGACAATAGAAGATTACTATGTCTACTTGTTTCCGAAATATCACCCCTCTAGGGTGCTTACTCTTGTGTATCAGCCATTTGCTGTTGGAACAATTTTGATTCTGACGTATAATGAGGCCAAACTCAATACACGACTAAGGAATCTGTTTGGATATATACTTTTTTTCATAAGCACTTTGTTGGTGTTAATTTTGAATTCAGCAACATCTGGTAAAGGAGGGCTTGGAACTTTCATTGGTATATGCGCACTTAGTGGTGCTTTTGGAGTTGCAGATGCTCATGTTCAAGGTGGAATGGTGGGAGACTTGTCCTACATGAAACCAGAATTCATTCAGTCTTTTCTTGCTGGTTTGGCAGCATCCGGTGCATTAACCTCTGCTTTGAGGTTAATTACAAAAGCAGCATTTGACAATTCTAGGGATGGTCTCCGCAAAGGAGCCATTCTTTTCTTTGCCATATCAACATTCTTTGAGCTTCTTTGTGTTGTTCTCTATGCATTTGTTTTCCCCAAAATACCAATTGTGAAGTACTACCGTTCAAAGGCAGCATCAGAAGGATCCAAAACTGTTTCAGCTGACCTTGCAGCTGGTGGAATCCAGACATTACCTGGAACAGACACGGAATTAACAAAAGATCCAGAGCGGAAGGGAAACAAGCAATTGTTGTTGGAAAACATTGATTATGCACTTGATCTATTCCTAATCTATATGCTAACACTGTCTATTTTCCCAGGATTCCTGTCAGAAGATACTGGATCACATAGCTTAGGCACTTGGTATGCTCTAGTTTTAATTTCTATGTATAATGTGTGGGATCTGATTGGAAGATACATTCCACTCTTGAAATGCTTGAAGTTGGAGTCCAGAAAGTTGATCACAATAGCAATTCTTAGTCGTTTCTTACTTGTTCCAGCATTTTATTTCACTGCAAAGTATGGTGACCAGGGCTGGATGATATTCTTAACGTCCTTCTTGGGGCTATCCAATGGCTATCTCACTGGTCCAGAACAAAATGCATTGGGAAACCTATTGGTGTTGTTTCTTCTTGGAGGTATTTTTGCAGGGGTGACACTTGACTGGCTGTGGTTGATAGGTAAAGGGTGGTGA 1209 0.4078 MVNSEVSTRLEGKYAAVVVCWLLGNGCLFSWNSMLTIEDYYVYLFPKYHPSRVLTLVYQPFAVGTILILTYNEAKLNTRLRNLFGYILFFISTLLVLILNSATSGKGGLGTFIGICALSGAFGVADAHVQGGMVGDLSYMKPEFIQSFLAGLAASGALTSALRLITKAAFDNSRDGLRKGAILFFAISTFFELLCVVLYAFVFPKIPIVKYYRSKAASEGSKTVSADLAAGGIQTLPGTDTELTKDPERKGNKQLLLENIDYALDLFLIYMLTLSIFPGFLSEDTGSHSLGTWYALVLISMYNVWDLIGRYIPLLKCLKLESRKLITIAILSRFLLVPAFYFTAKYGDQGWMIFLTSFLGLSNGYLTGPEQNALGNLLVLFLLGGIFAGVTLDWLWLIGKGW 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0875 402 Pfam Nucleoside transporter 124 396 IPR002259 GO:0005337|GO:0016021|GO:1901642
Aed1g0875 402 PIRSF ENT 3 400 IPR002259 GO:0005337|GO:0016021|GO:1901642
Aed1g0875 402 PANTHER EQUILIBRATIVE NUCLEOTIDE TRANSPORTER 2 3 401 IPR030200 -
Aed1g0875 402 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 3 401 IPR002259 GO:0005337|GO:0016021|GO:1901642
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0875 Aed-Chr1 9302542 9308050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0875 3 400 Organic Solute Cotransporters AT4G05120 69.007 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0875 K15014 - gmx:100798899 737.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0875 1 9302542 9308050 Aed1g0875 1 9302542 9308050 ECH
Aed1g0875 1 9302542 9308050 Aed5g0797 5 6028056 6031700 PCT