Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0736 ATATGTGTTTACCGGTTGTCTTCTGTCAGAAAAATCCCAAGAGATTTAACCGAGGCATCAGTATCTGGAGCAGGGTTATCCATTGTAGCAGCTCTCGCCATGATATTTTTATTTGGAATGGAGCTTAATAGTTATTTGACTGTCAGCACCTCTACATCAGTGATTGTTGACAAGAGTTCTGATGGGGACTATTTACGTATAGAATTCAATATCAGTTTTCCTGCCCTCTCCTGTGAGTTTGCAGCAGTTGATGTGAGTGACGTGCTGGGCACAAACAGGCTGAATCTAACAAAAACAGTTCGCAAGTTTTCTATTGATTCAAATTTAAGAACTACCGGTGCTGAATTCCAGTCAGAACCAGATGCTAACAGCATTAAGCACGGTAATGAAGGAAATGAAGAATCCATTGAAGGTTCTGTTGTACTCACAACACAGACTTTTGATAAATATGCTCATCAGTTTCCAATTACAGTTGTTAATTTTTATGCTCCTTGGTGTTACTGGAGTCAACGCTTGAGAGCTTCATGGGAGAAGGCAGCTAAAATAATTAAAGAGCGATATGATCCAGAAGTTGATGGCCGTATTATTATGGGGAGGGTAGATTGTACTGACGAAGGAGACTTGTGCCGGAGCCATCATATACAAGGGTATCCTTCAATTCGTATCTTTCGTAAAGGAAGTGATGTTAGAACTGACCATGGATATCATGATCACGAGTCCTATTATGGAGATCGTGACTCAGATAGCCTAGTCAAGACAATGGATAATTTAGTGGCATCTCTCCCTTCAGATTCTCAGAAGTTACCTTTGGAGGATAAATCCAATGTTGCGATAAATACAAAAAGACCAGCACCATCAGCAGGGGGATGTAGAATTGACGGATATGTGCGTGTCAAGAAGGTTCCTGGAAACTTGATCATCTCAGCTAGATCCAATGCTCATTCCTTTGATGCTTCTCAAATGAACATGTCACATGTCATAAACCATTTATCTTTTGGAAGGAAAGTGTCACCTAGGGTCATGAGTGATGTGAAGCGCTTGATGCCTTACGTTGGTAGCAGCCATGACAGGCTGAATGGTCGGTCATTTATCAATACACAAGAGTTAGGAGCAAATGTTACTATGGAGCATTACCTTCAGATAGTTAAAACAGAGGTGGTAACTAGAAAGGATTATAAATTAGTTGAGGAGTATGAGTACACAGCGCACAGCAATGTGGCACAGAGTGTACACATTCCTGTTGCTAAGTTCCATCTTGAGCTCTCCCCCATGCAGGTCCTAATAACGGAAAACCAGAAGTCCTTTTCTCACTTTATTACAAATGTCTGTGCTATTATTGGGGGTGTTTTCACGGTTGCTGGAATTATGGACGCGATTTTGCACAACACTATTAGACTAATGAAAAAAGTTGAGCTTGGCAAAAATTTTTGA 1431 0.4074 ICVYRLSSVRKIPRDLTEASVSGAGLSIVAALAMIFLFGMELNSYLTVSTSTSVIVDKSSDGDYLRIEFNISFPALSCEFAAVDVSDVLGTNRLNLTKTVRKFSIDSNLRTTGAEFQSEPDANSIKHGNEGNEESIEGSVVLTTQTFDKYAHQFPITVVNFYAPWCYWSQRLRASWEKAAKIIKERYDPEVDGRIIMGRVDCTDEGDLCRSHHIQGYPSIRIFRKGSDVRTDHGYHDHESYYGDRDSDSLVKTMDNLVASLPSDSQKLPLEDKSNVAINTKRPAPSAGGCRIDGYVRVKKVPGNLIISARSNAHSFDASQMNMSHVINHLSFGRKVSPRVMSDVKRLMPYVGSSHDRLNGRSFINTQELGANVTMEHYLQIVKTEVVTRKDYKLVEEYEYTAHSNVAQSVHIPVAKFHLELSPMQVLITENQKSFSHFITNVCAIIGGVFTVAGIMDAILHNTIRLMKKVELGKNF 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0736 476 Pfam Endoplasmic reticulum vesicle transporter 284 457 IPR012936 -
Aed1g0736 476 Gene3D Glutaredoxin 124 281 - -
Aed1g0736 476 Pfam Thioredoxin 140 237 IPR013766 -
Aed1g0736 476 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 9 93 IPR039542 -
Aed1g0736 476 ProSiteProfiles Thioredoxin domain profile. 113 259 IPR013766 -
Aed1g0736 476 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 9 476 IPR045888 -
Aed1g0736 476 PANTHER PROTEIN DISULFIDE-ISOMERASE 5-3 9 476 - -
Aed1g0736 476 SUPERFAMILY Thioredoxin-like 140 257 IPR036249 -
Aed1g0736 476 CDD PDI_a_family 140 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0736 Aed-Chr1 8415094 8420415 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0736 - - gmx:100806869 864.374
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0736 1 8415094 8420415 Aed1g0736 1 8415094 8420415 ECH