Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0725 ATGTTTGTTTTGTTTGAGCGTTCAAAATTCTCTAGTCAAGAACTGATTTCGTATGTTGTAGTTGTGATTGCATGCCCTTTCAGGCTCAAGTGGTTTTTGTATCACTTCCTCTTCATCGTAAGGTGGGGGAATCCGTTTGCCACCCATTTGAGACAACTGTCATGGTCTGAAGCCTTTCATTTCTATCTCACTGATATCTCAAGGATGGACCAACATGAATCTCTCAGATCAAGCCTTGAAGCTTTTGCAACAAGAATGTTCTCCCTTGCCCAAAGCTTGGCGGAAATACTAGCCTGCAAAATGAATACGAAATCCAACTATTTCCGAGAACATTGCTTGCCAAAAAGTTCTTTCATTCGACTTAATAGATATCCTCCATGCCCTATATCGTCAAAGGTCCATGGCTTGTTGCCTCACAGTGACACTAGTCTTCTTACCATCGTGCATCAAGACCAAGTTGGAGGATTGCAATTGCTCAAAGATGGAAAATGGGTTGGTGTCAAGCCTAATCCACATGCTCTCGTCGTTAATATTGGTGACTTATTTCAGCAAGTTCAGGAGTACTAA 567 0.418 MFVLFERSKFSSQELISYVVVVIACPFRLKWFLYHFLFIVRWGNPFATHLRQLSWSEAFHFYLTDISRMDQHESLRSSLEAFATRMFSLAQSLAEILACKMNTKSNYFREHCLPKSSFIRLNRYPPCPISSKVHGLLPHSDTSLLTIVHQDQVGGLQLLKDGKWVGVKPNPHALVVNIGDLFQQVQEY 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0725 188 Gene3D - 38 186 IPR027443 -
Aed1g0725 188 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 37 184 - -
Aed1g0725 188 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 115 188 IPR005123 -
Aed1g0725 188 SUPERFAMILY Clavaminate synthase-like 36 183 - -
Aed1g0725 188 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 37 184 - -
Aed1g0725 188 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Aed1g0725 188 Pfam 2OG-Fe(II) oxygenase superfamily 119 183 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0725 Aed-Chr1 8370867 8373694 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0725 53 185 Glycosyltransferase AT5G59530 34.074 2.92e-20 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0725 - K04125 gmx:100786176 281.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0725 1 8370867 8373694 Aed1g0725 1 8370867 8373694 ECH