Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0718 ATGGTTGGATCATTGACTTCTGCTAGAAATAGGGATTACAGAGTCACCAATCGCCTCCAAGAGGGAAAACATCCTCTATATGGCGTCGTTTTCAACTTCCTTGACTCTCGCTACCTTGATGTTTTTGCCACTGTTGGAGGAAACAGGGTTACTGTTTATCAATGCCTTAAAGAAGGGGTTATTGTTGTTTTGCAATCTTATGTGGATGATGATCAGAAGAATGAGTCTTTTTACTGTATGGGTTGGGCATGCAATGTTGATGGGTCCCCACTTGTTGTGGTTGGAGGACTCAATGGGATAATTCGAGTCATTGATGCTGGCAGTGAGAAGCTATACAAGAGTTTTGTTGGCCATGGAGATGCCATAAATGAAATTAGAGCTCAGACATCAAATCCAACACTTGTGGTATCTGCAAGCAAAGATGAATCTCTCCGACTATGGAATATTCCAACTGGAATATGCATTTTGATATTTGGTGGAGCTGGAGGACATCGTAATGAAGTCTTGAGTGTTGATTTTCATCCAACAGATAGGTATCGTATTTGTAGTTGTGGAATGGATAGTACTGTAAAAATATGGTCTATCAAGGATTACTGGATATTTGTAGAAAAATCATCCACATGGACAGATCTTCCTTCCAAGTTTCCAACAAAATATGTCCAGTTTCCTGTATACACTTCTTCAGTGCATATGAATTATGTTGACTGTAATAGGTGGATGGGCGATTTTATCATCTCAAAGAGTGTTGATAGTGAAATTCTCTTGTGGGAACTTGAAGTGAAGGAACAAACTCCAGGAGAGGGTGTGGTTGACGTTCTCCAGAGATACCCTATTCCTGATTGTGATATCTGGTTCATCAAATTTTCTTGTGACTTCCAATTCAACATAGCTGCAACAGGTAACAAGGCAGGGAAGATTCTTGTTTGGGAATTGCAGTTGACACATCCTCATTCAAAATCTCCAATCAGGCAGACTGCTACATCCTTTGATGGAAGAACTATATTGAGTTGCTGTGAGGATGGGACAATATGGCGTTGGGATGATTTTTCAAAACCACCAACACCAATACCAACCCCAACACCAACCTAA 1089 0.405 MVGSLTSARNRDYRVTNRLQEGKHPLYGVVFNFLDSRYLDVFATVGGNRVTVYQCLKEGVIVVLQSYVDDDQKNESFYCMGWACNVDGSPLVVVGGLNGIIRVIDAGSEKLYKSFVGHGDAINEIRAQTSNPTLVVSASKDESLRLWNIPTGICILIFGGAGGHRNEVLSVDFHPTDRYRICSCGMDSTVKIWSIKDYWIFVEKSSTWTDLPSKFPTKYVQFPVYTSSVHMNYVDCNRWMGDFIISKSVDSEILLWELEVKEQTPGEGVVDVLQRYPIPDCDIWFIKFSCDFQFNIAATGNKAGKILVWELQLTHPHSKSPIRQTATSFDGRTILSCCEDGTIWRWDDFSKPPTPIPTPTPT 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0718 362 ProSitePatterns Trp-Asp (WD) repeats signature. 135 149 IPR019775 -
Aed1g0718 362 PRINTS G protein beta WD-40 repeat signature 135 149 IPR020472 -
Aed1g0718 362 PRINTS G protein beta WD-40 repeat signature 181 195 IPR020472 -
Aed1g0718 362 PRINTS G protein beta WD-40 repeat signature 244 258 IPR020472 -
Aed1g0718 362 ProSiteProfiles Trp-Asp (WD) repeats profile. 161 196 IPR001680 GO:0005515
Aed1g0718 362 PANTHER BNAA05G20190D PROTEIN 1 351 - -
Aed1g0718 362 ProSiteProfiles Trp-Asp (WD) repeats profile. 115 157 IPR001680 GO:0005515
Aed1g0718 362 Pfam WD domain, G-beta repeat 111 148 IPR001680 GO:0005515
Aed1g0718 362 Pfam WD domain, G-beta repeat 154 194 IPR001680 GO:0005515
Aed1g0718 362 Pfam WD domain, G-beta repeat 316 347 IPR001680 GO:0005515
Aed1g0718 362 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 161 196 - -
Aed1g0718 362 SMART WD40_4 60 105 IPR001680 GO:0005515
Aed1g0718 362 SMART WD40_4 308 347 IPR001680 GO:0005515
Aed1g0718 362 SMART WD40_4 151 194 IPR001680 GO:0005515
Aed1g0718 362 SMART WD40_4 220 257 IPR001680 GO:0005515
Aed1g0718 362 SMART WD40_4 108 148 IPR001680 GO:0005515
Aed1g0718 362 Gene3D - 10 349 IPR015943 GO:0005515
Aed1g0718 362 PANTHER POLYCOMB PROTEIN 1 351 - -
Aed1g0718 362 SUPERFAMILY WD40 repeat-like 18 347 IPR036322 GO:0005515
Aed1g0718 362 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 115 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0718 Aed-Chr1 8314820 8318268 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0718 K11462 - gmx:100795288 600.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0718 1 8314820 8318268 Aed1g0718 1 8314820 8318268 ECH