Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0711 ATGGCTCCTCTCACAAACTTGCATGGAGCAGTCTCCAAAGCCTTAATTCCCATCACATGCCACCTTCCAAATGCACACAAAAGCACAAAGAGGGGACAAGTAGTTGGATTTCTTGGAAGCAAAACACAAGAGGAACCATCAGAGTGTAGTGCAGTTTTGGCCACAAGAAGAGCAGCCGCATTAGGCCTTGCAACTGTAGTGCTTACTTTGCAATTCAATGACAAGGTTTCATTGGCCAAAGATAATGGCTTCTGTGAGTTGAAATTTGGCTTTCATGATATTGCAAATGAGAAAACGGGGACACGCTCTTTTCTGAAGAGGGGGCTGTACATAGCAAATATTGGAGTGAAAGGAAGTGTGTTTAGGATAAAGAAATATGCATTTGATCTTCTGGCAATGGCGGATTTAGTAGCAGAAGACACACTCAACTATGTGAGGAAGTACCTAAGACTCAAGTCCACCTTCATATACTATGATTTTGACAAGCTTGAAGAAGCTTCAAGGAAGAAAAGTTTTCCTGAAACAAAATCATGCTATCAGGAAACTGAAGTAATGCTTAAAGAGGTCATGGACCGGATGGATATAATGTACAAAACAATTTGA 603 0.4096 MAPLTNLHGAVSKALIPITCHLPNAHKSTKRGQVVGFLGSKTQEEPSECSAVLATRRAAALGLATVVLTLQFNDKVSLAKDNGFCELKFGFHDIANEKTGTRSFLKRGLYIANIGVKGSVFRIKKYAFDLLAMADLVAEDTLNYVRKYLRLKSTFIYYDFDKLEEASRKKSFPETKSCYQETEVMLKEVMDRMDIMYKTI 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0711 200 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 161 193 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Aed1g0711 200 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 1 163 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Aed1g0711 200 Gene3D - 86 163 IPR023222 -
Aed1g0711 200 Pfam Oxygen evolving enhancer protein 3 (PsbQ) 29 166 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Aed1g0711 200 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 3, CHLOROPLASTIC 161 193 - -
Aed1g0711 200 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 3, CHLOROPLASTIC 1 163 - -
Aed1g0711 200 SUPERFAMILY Oxygen-evolving enhancer protein 3, 110 193 IPR023222 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0711 K08901 - gmx:100814163 304.293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0711 1 8274709 8276301 Aed1g0711 1 8274709 8276301 ECH