Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0707 ATGGCAGGTAGAGGCAAAACCCTAGGATCGAGCGCGGCCAAGAAGGCCACCTCTAGGAGCAGCAAAGCCGGCCTCCAATTTCCCGTCGGCCGTATCGCCAGATTCCTCAAGGCCGGAAAATACGCCGAGCGCGTCGGCGCAGGCGCTCCCGTCTACCTCGCCGCCGTCCTCGAATATCTTGCCGCCGAGGTTTTGGAATTGGCTGGAAACGCTGCGAGAGACAACAAGAAGACTCGAATTGTGCCTCGCCACATTCAATTGGCCGTTAGGAACGACGAAGAGTTGAGCAAGCTTCTCGGTGACGTCACCATCGCTAACGGTGGCGTTATGCCAAACATTCACAATCTTCTCCTTCCAAAGAAGGCTGGTGGCTCATCCAAGGGTGCTGCTGCTGCTGACGATGACTCTTAG 411 0.5669 MAGRGKTLGSSAAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGGSSKGAAAADDDS 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0707 136 CDD H2A 9 121 IPR002119 GO:0000786|GO:0003677|GO:0030527
Aed1g0707 136 PANTHER HISTONE H2A.6 2 131 - -
Aed1g0707 136 SUPERFAMILY Histone-fold 10 123 IPR009072 GO:0046982
Aed1g0707 136 SMART h2a4 4 124 IPR002119 GO:0000786|GO:0003677|GO:0030527
Aed1g0707 136 Pfam Core histone H2A/H2B/H3/H4 11 90 IPR007125 GO:0003677
Aed1g0707 136 ProSitePatterns Histone H2A signature. 23 29 IPR032458 -
Aed1g0707 136 PRINTS Histone H2A signature 73 87 IPR002119 GO:0000786|GO:0003677|GO:0030527
Aed1g0707 136 PRINTS Histone H2A signature 44 59 IPR002119 GO:0000786|GO:0003677|GO:0030527
Aed1g0707 136 PRINTS Histone H2A signature 101 119 IPR002119 GO:0000786|GO:0003677|GO:0030527
Aed1g0707 136 PRINTS Histone H2A signature 59 72 IPR002119 GO:0000786|GO:0003677|GO:0030527
Aed1g0707 136 PRINTS Histone H2A signature 15 37 IPR002119 GO:0000786|GO:0003677|GO:0030527
Aed1g0707 136 Pfam C-terminus of histone H2A 93 127 IPR032454 -
Aed1g0707 136 Gene3D Histone, subunit A 1 129 IPR009072 GO:0046982
Aed1g0707 136 MobiDBLite consensus disorder prediction 1 23 - -
Aed1g0707 136 PANTHER HISTONE H2A 2 131 IPR002119 GO:0000786|GO:0003677|GO:0030527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0707 Aed-Chr1 8251318 8252562 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0707 K11251 - gmx:100500068 210.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0707 1 8251318 8252562 Aed1g0707 1 8251318 8252562 ECH