Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0702 ATGGAGAAAGCTGCACTTCTCAAGAGGGTGGTAAATAAGAAGAAGAACAACAACAAAGGTGAAATAGGTGATTGTTATTCTCCTGCAGCAACATACTGTGTTACTGGAGCATCAGGGTATATTGGTTCATGGCTTGTGGAGGCTCTTCTTGAAAGAGGCTACACTGTTCATGCCACTGTTAGAGATCCTGAGGCCTATGTTCAAGCTAATTTAATTGATCCTGCAATCAAAGGAACCATAAACCTTCTAAAATCCTGCATGAATTCCAATTCTGTGAAAAGAGTTGTTTTCACATCTTCAATAAGTACCATTACTGCCAAAGAGAGCAATGGAAAGTGGAAACCTCTTGTTGATGAAACTTGCCAAATCCAAAGTGAGCATGTGTTGAAAACACAAGCAAGTGGATGGGTTTATGCACTTTCAAAGCTTCTAACAGAAGAGGCAGCATTTAAGTTTGCAAAAGAGAATGGCATTGATCTTGTGTCAGTCATAACAACCACTGTTGCAGGCCCATTCTTCACAGCTAGTGTACCATCAAGTGTTAAAGTCCTGCTGTCACCAATAACAGGTGAACCTGAGTTCTTCAAGATATTATCTGCTGTAAATGCACGAATGGGGTCAATTGCTTTAGTTCACATTGAAGATATATGCAGTGCACACATATTCCTAATGGAGCATTCTAAAGCAGAAGGTCGATATATATGTAGCAGCCAAAGTTGTCCAGTGTCTATGATTGCTGAGAAGAATTATGATAATGTTCCTTCTGAGATTTCCTCAAAGAAATTAAAAGATTTGGGTTTTAGTTACAAGCATGGACTTGAAGATATAATCCATCAGACAACTATTTGTTCCCTAGATTATGGTTATTTACCTCCCATTAGACAATAG 888 0.3874 MEKAALLKRVVNKKKNNNKGEIGDCYSPAATYCVTGASGYIGSWLVEALLERGYTVHATVRDPEAYVQANLIDPAIKGTINLLKSCMNSNSVKRVVFTSSISTITAKESNGKWKPLVDETCQIQSEHVLKTQASGWVYALSKLLTEEAAFKFAKENGIDLVSVITTTVAGPFFTASVPSSVKVLLSPITGEPEFFKILSAVNARMGSIALVHIEDICSAHIFLMEHSKAEGRYICSSQSCPVSMIAEKNYDNVPSEISSKKLKDLGFSYKHGLEDIIHQTTICSLDYGYLPPIRQ 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0702 295 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 29 64 - -
Aed1g0702 295 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 65 281 - -
Aed1g0702 295 Pfam NAD dependent epimerase/dehydratase family 70 229 IPR001509 -
Aed1g0702 295 Pfam NAD dependent epimerase/dehydratase family 33 65 IPR001509 -
Aed1g0702 295 Gene3D - 26 67 - -
Aed1g0702 295 Gene3D - 68 291 - -
Aed1g0702 295 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 31 284 IPR036291 -
Aed1g0702 295 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 29 64 - -
Aed1g0702 295 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 65 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0702 Aed-Chr1 8224966 8228321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0702 27 285 Miscellaneous Gene Families AT4G27250 48.802 5.05e-99 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0702 - - gmx:100793923 419.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0702 1 8224966 8228321 Aed1g0702 1 8224966 8228321 ECH