Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0701 ATGGCAGCCATGGCTGCACTTCAGAGCTCAATGGCCGGTCTCTCCCTCTCCTCCAACTCTTTCTTAGGCCAACGCTTTTCTCCCATCACTCCCCCTTCTCTTCTTCTGGGTGGTAAGTCAACGGAGAAGCAATGTCCTATTGTAATGAAGCTTAAACGATGGGAACGGAAGAAGTGCAAACCAAACAGCCTTCCTGTCCTGCACAAAATGCATGTTAAACTTGGAGATACGGTGCAAGTCATTTCTGGGCGCGAAAGGGGTAAAGTTGGGGAGATTAGTAAAATCTTCAAGCATAACAGCACTATTATAGTGAAAGATTTAAATTTGAAGACAAAGCATGTGAAGAGTAGAGAAGAGGGGGAACCAGGGCAAATTATTAAGATTGAAGGTCCAATCCACAGCTCAAATGTGATGCTCTACTCCAAAGATCAGAAGGTAGCAAGCCGTGTGGGACATAAAGTCCTTGATAATGGTTCAAAAGTCCGGTACCTTGTAAAAACTGGAGAAGTAATTGATGATGCAGAGAACTGGAAGAAACTGAAGGAGGCTACTAAGAAAACTGAAGAAGCTTCTGCTGCTGCCTAG 585 0.4444 MAAMAALQSSMAGLSLSSNSFLGQRFSPITPPSLLLGGKSTEKQCPIVMKLKRWERKKCKPNSLPVLHKMHVKLGDTVQVISGRERGKVGEISKIFKHNSTIIVKDLNLKTKHVKSREEGEPGQIIKIEGPIHSSNVMLYSKDQKVASRVGHKVLDNGSKVRYLVKTGEVIDDAENWKKLKEATKKTEEASAAA 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0701 194 Hamap 50S ribosomal protein L24 [rplX]. 70 166 IPR003256 GO:0003735|GO:0005840|GO:0006412
Aed1g0701 194 SMART kow_9 71 98 IPR005824 -
Aed1g0701 194 SUPERFAMILY Translation proteins SH3-like domain 68 170 IPR008991 -
Aed1g0701 194 CDD KOW_RPL26 75 139 IPR041988 GO:0003723
Aed1g0701 194 Pfam Ribosomal proteins 50S L24/mitochondrial 39S L24 107 171 IPR003256 GO:0003735|GO:0005840|GO:0006412
Aed1g0701 194 Pfam KOW motif 75 105 IPR005824 -
Aed1g0701 194 ProSitePatterns Ribosomal protein L24 signature. 75 92 IPR005825 GO:0003735|GO:0005840|GO:0006412
Aed1g0701 194 PANTHER 50S RIBOSOMAL PROTEIN L24, CHLOROPLASTIC 4 194 - -
Aed1g0701 194 TIGRFAM rplX_bact: ribosomal protein uL24 69 171 IPR003256 GO:0003735|GO:0005840|GO:0006412
Aed1g0701 194 Gene3D - 65 170 IPR014722 -
Aed1g0701 194 PANTHER MITOCHONDRIAL RIBOSOMAL PROTEIN L24 4 194 IPR003256 GO:0003735|GO:0005840|GO:0006412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0701 K02895 - gmx:100306643 313.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0701 1 8220481 8223539 Aed1g0701 1 8220481 8223539 ECH