Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0696 ATGTCCCTTCCAGCTTCAACTCAACATGCAGTAGTATCCGACCTCAACCGTCCTGTTACAACTTTTGCTCCTAGCATATGGGGAGATACTTTCCTTCAATATGCTTCTCAAACTCATCACCAGGAAATCACTGATAATGTGATTCAGCAGCAAGCTCATCAAATATTAAAAGAGAAGGTCAAATTGATGTTTCAATCACCAAATCAAAATATCATGCAAAAACTTAACTTCATCGATTCAATCCAACGTTTCGGAATATCCTACCATTTCGAAATAGAAATTAATGAAGCATTAGAACAAGTTTACAACACTTTTACCAAGAATAACACCATCATCAGTACTGAAGATGGCAGTCTTCACTCTCTTGCTCTATTATTTCGTTTGCTTAGGCAACAAGGATACCAAATTTCATCAAGTGTATTTCACAAATTCAAAAATGACCAAGGGAGCTTCAATGAAACACTTGCAAATGATATTCAAGGGTTGTGTAGTTTGTATGAAGCTACACATCTAAGAACTCATGGAGATGCTGTACTTGAAGAAGCCTATGACTTTTCAAGTACTCATTTTAAGTCATTGGCCAACAAATTGAGTCCATCTCTTGCTGAACAAATCAATCACTGCTTAAGGGAACCTCTTAACAAAGTTGTACTTTGCCAAAGATATCACATGACTCTGTATGAAAAAGATCCATCTCATGACAAAACTTTACTTACCTTTGCAAAAGTGGATTTCAATATTATTCAAAAATTGCACCAAAAAGAAATTGGCACGATAACCAAATGGGATATCAGTTTAATTGACTCTCTTCCACAATGCATGAAAGAAGTATTTGATACAATTGTAGAACTGTGTGAAGAAATAGAGTTGGATACAATTGAAAGTGGAAAATCAAGCTTCGTGGTGCCACGTTTTAAACAATCTGTTTATATCTTAATAAAAGGCTACATGGTTGAAGCCAGATGGTGCCACGAGGGTTACATTCCAACGTATGATGAGTATAAAGTTAATGGAGTCTTGAGTTCTGCTTTCCATTATTTGATAACATCGTATGTTGGTCTGGGAAAATATGCAACAGAGGATGTGTTTGATTGGATTTTCAGTTATCCAAAAATCATTGAAGCTGCAGCAATCATTGGCAGAGTCTTGAATGACACATGCTCACGTGAGTTTGAGCAACAAAGAGTACACGTTGCCTCGGCTGTCGAATGTTGCATGAAGCAATATGGTATTTCACAAGAAGAGGCCTATCATCACATTATCAAGGACGTTGAAGATTATTGGAAGGTTATAAATGAAGAGTGTCTCAAGTTAAACGATATTCCAAAGTCCGTGCTTGATTATATTGTTAATTATGCACGTATGGCTAAGGTTGTGTATGGAAACCGTCAAGATAAATACACAAATGGAGAATTACTTAAAGATTACGTCTCTTCATTACTTATAGATCCCATGTGGATCAATCAACCATTAGGAGAAGTTATTTCATATATAAATGAGTAG 1503 0.3606 MSLPASTQHAVVSDLNRPVTTFAPSIWGDTFLQYASQTHHQEITDNVIQQQAHQILKEKVKLMFQSPNQNIMQKLNFIDSIQRFGISYHFEIEINEALEQVYNTFTKNNTIISTEDGSLHSLALLFRLLRQQGYQISSSVFHKFKNDQGSFNETLANDIQGLCSLYEATHLRTHGDAVLEEAYDFSSTHFKSLANKLSPSLAEQINHCLREPLNKVVLCQRYHMTLYEKDPSHDKTLLTFAKVDFNIIQKLHQKEIGTITKWDISLIDSLPQCMKEVFDTIVELCEEIELDTIESGKSSFVVPRFKQSVYILIKGYMVEARWCHEGYIPTYDEYKVNGVLSSAFHYLITSYVGLGKYATEDVFDWIFSYPKIIEAAAIIGRVLNDTCSREFEQQRVHVASAVECCMKQYGISQEEAYHHIIKDVEDYWKVINEECLKLNDIPKSVLDYIVNYARMAKVVYGNRQDKYTNGELLKDYVSSLLIDPMWINQPLGEVISYINE 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0696 500 Gene3D Farnesyl Diphosphate Synthase 24 259 IPR008949 -
Aed1g0696 500 Pfam Terpene synthase family, metal binding domain 259 429 IPR005630 GO:0000287|GO:0010333|GO:0016829
Aed1g0696 500 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 24 233 IPR008930 -
Aed1g0696 500 PANTHER OS04G0344100 PROTEIN-RELATED 262 483 - -
Aed1g0696 500 PANTHER OS04G0344100 PROTEIN-RELATED 4 262 - -
Aed1g0696 500 Gene3D - 69 233 IPR036965 GO:0010333|GO:0016829
Aed1g0696 500 CDD Terpene_cyclase_plant_C1 17 484 IPR044814 GO:0010333|GO:0016102
Aed1g0696 500 PANTHER TERPENE SYNTHASE FAMILY, METAL-BINDING DOMAIN PROTEIN 262 483 - -
Aed1g0696 500 PANTHER TERPENE SYNTHASE FAMILY, METAL-BINDING DOMAIN PROTEIN 4 262 - -
Aed1g0696 500 Pfam Terpene synthase, N-terminal domain 26 209 IPR001906 GO:0010333|GO:0016829
Aed1g0696 500 SUPERFAMILY Terpenoid synthases 233 485 IPR008949 -
Aed1g0696 500 Gene3D Farnesyl Diphosphate Synthase 260 485 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0696 Aed-Chr1 8182010 8185023 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0696 K15803 - mtr:MTR_2g082050 444.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0696 1 8182010 8185023 Aed1g0696 1 8182010 8185023 ECH