Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0686 ATGCCTGAGGCTCCCAGGGACTCTTCCTCCACCGAGAACTATGTTCTCGAGGAGAAGAACAAGAAGATTCTGGAGTTCATAGAGGACGTGACTAACAACGCAGATGAAGTCCAGAAGAAGGTTCTCTCCGAAATTCTGTCCCGCAATGCAAACGTTGAGTACCTGCGGCGACATGGTGTCATTAACGGCGCCGAAACCGACCGCGACACGTTTAAGAGGCTTCTCCCTGTCATTTCCTACGAGGACATCCAACCCGACATCAACCGCATCGCCAATGGCGACAAATCTCCTATCCTCACCTCAAAACCCATCTCTGAGTTTCTCACCAGCTCTGGGACATCAGGGGGTGAGAGAAAGCTGATGCCAGCAATAGAGGAGGAGCTAGAGAGAAGGTGTAGTTTGTACAGCCTCTTGATGCCAATAATGAGCCAATTTGTCCCCGACTTGGAAAAAGGAAAAGGAATGTACCTAATGTTCATAAAATGCGAGTCCAAAACCCCCGGAGGAATAGTGGCACGCCCAGTTCTCACAAGCTACTACAAAAGCCCTTACTTTAGGGACAGACCCTACGACCCATACACAAACTACACAAGCCCAAACGAGACCGTACTCTGCCCCGACTCATACCAAAGCATGTACTCCCAACTCCTATGTGGCCTTTCCCAGAACAAAGAGGTTCTAAGAGTTGGTGCCATTTTCGCCTCTGGCTTCATCCGTGCCATTAGGTTCCTCGAGAAACACTGGACCCTACTTTGCAATGACATCAAAACAGGAACCCTTAACGCTTTAATCACTGACCCATCGGTTAGAGAGGCCGTGATGAGGATCCTCACCAAGCCTGATCCCAAGCTTGCGGATTTCATACACAACGAGTGTAGCAAAAAGGGAACTTGGCAAGGGATTATTACTAGGCTTTGGCCTAATACAAAGTATGTGGATGTTATTGTGACGGGGACTATGGCACAATATATTCCCACTTTGGATTACTATAGCAATGGCCTCCCACTTGTGTGCACCATGTATGCTTCTAGTGAGTGTTATTTTGGTGTCAACCTTAACCCTCTTTGCAAACCTAGTCATGTGTCTTACACCCTCATCCCCACCATGTGCTACTATGAATTCTTACCAGTCAATCGAAGCGCCAACGCTTCAAGATCATCACCATCACCGGCACCAACTTCTCTCAACCAGGCACAACAACAAGAATTGGTGGAGCTTGTTGATGTCAAACTTGGCCAAGAATATGAGCTAGTTGTCACAACTCATGCAGGACTTTATAGGTACAGAGTGGGAGATATACTAAGGGTGTCAGGATTCAAGAACAAGGCCCCTCAGTTTAGCTTTGTTTGTAGAAAGAACGTTGTACTGAGCATAGATTCCGACAAGACCGACGAGGTTGAGCTTCATAACGCAATGAAAAATGCAGTGACACACTTGGAGCCATTTGATGCACACGTGAGTGAGTACACAAGCTATGCAGAAACCGCCACAATCCCTGGCCACTATGTGTTGTATTGGGAGCTCAACCTCAAAGGGTCAACCCCTATTCCACCCTGCGTGTACGAGGATTGTTGCTTAACCATTGAGGAGTCACTGAACAGCGTGTATCGCCAAGGACGTGTGTCCGACAAATCAATAGGGCCACTTGAGATAAAGATTGTGGAACAAGGCACCTTTGACAAACTCATGGACTATGCTATTAGCTTAGGGGCATCGATTAATCAGTATAAGGCACCAAGGTGCGTCAAGTTTGCCCCCATTGTGGAATTGTTGAACTCGAGGGTCATATCCAACTATTTCAGTCCTAAGTGTCCTAAGTGGGTTCCGGGACACAAACAGTGGATCCACCAGAATTGA 1857 0.4744 MPEAPRDSSSTENYVLEEKNKKILEFIEDVTNNADEVQKKVLSEILSRNANVEYLRRHGVINGAETDRDTFKRLLPVISYEDIQPDINRIANGDKSPILTSKPISEFLTSSGTSGGERKLMPAIEEELERRCSLYSLLMPIMSQFVPDLEKGKGMYLMFIKCESKTPGGIVARPVLTSYYKSPYFRDRPYDPYTNYTSPNETVLCPDSYQSMYSQLLCGLSQNKEVLRVGAIFASGFIRAIRFLEKHWTLLCNDIKTGTLNALITDPSVREAVMRILTKPDPKLADFIHNECSKKGTWQGIITRLWPNTKYVDVIVTGTMAQYIPTLDYYSNGLPLVCTMYASSECYFGVNLNPLCKPSHVSYTLIPTMCYYEFLPVNRSANASRSSPSPAPTSLNQAQQQELVELVDVKLGQEYELVVTTHAGLYRYRVGDILRVSGFKNKAPQFSFVCRKNVVLSIDSDKTDEVELHNAMKNAVTHLEPFDAHVSEYTSYAETATIPGHYVLYWELNLKGSTPIPPCVYEDCCLTIEESLNSVYRQGRVSDKSIGPLEIKIVEQGTFDKLMDYAISLGASINQYKAPRCVKFAPIVELLNSRVISNYFSPKCPKWVPGHKQWIHQN 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0686 618 Pfam GH3 auxin-responsive promoter 27 583 IPR004993 -
Aed1g0686 618 PANTHER - 11 615 - -
Aed1g0686 618 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 11 615 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0686 Aed-Chr1 8141142 8144205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0686 16 601 EF-hand Containing Proteins AT1G23160 48.653 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0686 K14487 - gmx:100797120 1142.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0686 1 8141142 8144205 Aed1g0686 1 8141142 8144205 ECH