Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0673 ATGGAACTGGACTACCTTCTGGACTTCGAGGACTACTTCCCTTCCATGATTGCACACATGGGAGCTGAAGGGTTCATCGGAGAGCTCTGCAATGGGTTCCGCCTCCTCATGGACGTCACCAAGGGCCTCATCACTTTCGAGAGCCTCAAGACCAACTGCTACTTGCTTGGAATGGACGCTAGAGACGACGAGCTCGCCTGCATGCTCATGGAGGGCGATTTGGACGGTGACGGCGCTCTTAGTCAGATGGAGTTTTGCATTCTCATGTTCCGCCTCAGCCCTTGCTTGATGGATGCACCGCCGCCGCCACCTGCACCTACTAAACACCAGCACCAGCACCAGCCTGCTCCGCCTCCAGATAATACTATGTATCCTATCTTAATGTAA 387 0.5401 MELDYLLDFEDYFPSMIAHMGAEGFIGELCNGFRLLMDVTKGLITFESLKTNCYLLGMDARDDELACMLMEGDLDGDGALSQMEFCILMFRLSPCLMDAPPPPPAPTKHQHQHQPAPPPDNTMYPILM 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0673 128 SUPERFAMILY EF-hand 12 110 IPR011992 -
Aed1g0673 128 Gene3D - 7 101 - -
Aed1g0673 128 MobiDBLite consensus disorder prediction 99 121 - -
Aed1g0673 128 PANTHER CALCIUM-BINDING PROTEIN KIC 4 100 IPR044205 GO:0005509
Aed1g0673 128 ProSitePatterns EF-hand calcium-binding domain. 73 85 IPR018247 -
Aed1g0673 128 ProSiteProfiles EF-hand calcium-binding domain profile. 60 95 IPR002048 GO:0005509
Aed1g0673 128 PANTHER CALCIUM-BINDING PROTEIN PBP1-LIKE 4 100 - -
Aed1g0673 128 Pfam EF-hand domain pair 41 91 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0673 Aed-Chr1 8010657 8011043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0673 8 99 EF-hand Containing Proteins AT4G27280 60.638 1.03e-34 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0673 K24345 - gmx:100794479 189.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0673 1 8010657 8011043 Aed1g0673 1 8010657 8011043 ECH