Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0656 ATGGGTTATGTTTCTGTGAAAGTGATTCTAATCTCCACTGGGATTTTATCGATGGCTATGGGATTGAAACTCACACTCCCTTTGCTCTCGCATTTCCTCCTCAACGAAGCCCCGCACGTGTGGACCTTCCTCCTCACGTGCTTCACTCCTCCCTACCTCTACATCCTCATCAACTTCATCATCCTCACCATCGTCGCTTCCTCCAAACTCAGCAACCACCACCACTCTCCGCCGGATTACACCGTCCTCCTCCCCTCTCCCCCCGCCGTCTACGACAGACCACCCGCCGCCGTCCAGATCCCCGCTCCGGACACCGTCAACATCTCCGCCGCCGCACATACGGACTACTCCTCTGTTTCCTCTGACAATTACCTCTACGAAGCGAAACCGACGCTGAGCTACGATACGGTTGCCGATGGTCACGGCTCTGTCGGTTACGTTTTCGACGAGAACACGCCGGTGAAAGCAGCGGTTAACGACGACGAAGTCGTTGGCGTTCTCTCTCCGAGTCTGCAGAGGAAAGATTCCTCGGACTTCGCGTTCGCAAATGAGAACGAGAAACCGCCGGTTTCTGCCAGATTCAGCCACCGGAAATCCGTTAGAGCCAGTCCCGAAGGGGGGAAGGTGGTGGTGTTGGGAGTGGCGAAGGCGAAGAAACAAGAGACGTTGGAGAGCACGTGGAGGACGATAATGGAGGGGAGAGCGATGCCGTTAAATCGGCATTTGAAGAAGGCTGAGACATGGGAGACGGCGACGCCGTTAAGGGACTTGAACGGCGGGGCGGTGATGAAGAAGTCGGAGACGTTCACCGGGAGGGAGAAGAACGCGTCGGCGAGGCTGAGGAAGGAGGCGTCGCTGAGTCAGGACGAGTTGAACCGCCGAGTGGAAGCGTTCATCAACAAGTTCAACGCGGATATGAGGTTGCAGAGGCAGGAGTCGCTGAAACAATACAGGGAAATGACGAATCGGAATTAA 975 0.5579 MGYVSVKVILISTGILSMAMGLKLTLPLLSHFLLNEAPHVWTFLLTCFTPPYLYILINFIILTIVASSKLSNHHHSPPDYTVLLPSPPAVYDRPPAAVQIPAPDTVNISAAAHTDYSSVSSDNYLYEAKPTLSYDTVADGHGSVGYVFDENTPVKAAVNDDEVVGVLSPSLQRKDSSDFAFANENEKPPVSARFSHRKSVRASPEGGKVVVLGVAKAKKQETLESTWRTIMEGRAMPLNRHLKKAETWETATPLRDLNGGAVMKKSETFTGREKNASARLRKEASLSQDELNRRVEAFINKFNADMRLQRQESLKQYREMTNRN 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0656 324 Pfam Domain of unknown function (DUF4408) 38 70 IPR025520 -
Aed1g0656 324 PANTHER DUF761 DOMAIN PROTEIN 3 323 - -
Aed1g0656 324 Pfam Cotton fibre expressed protein 288 323 IPR008480 -
Aed1g0656 324 PANTHER COTTON FIBER (DUF761) 3 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0656 Aed-Chr1 7860354 7862151 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0656 - - gmx:100818795 547.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0656 1 7860354 7862151 Aed1g0656 1 7860354 7862151 ECH