Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0653 ATGGAGATCTCAAAAAGAAGTTCCCTCCTAATATTCTTGGTTGTGTTTGTGTCAAGCATGACCCATGCCAAGGCATATAAAAGCCTACAGTGTAGCACCAGAGGAACCCGATGCTATGGAAAGTACATAACATGTCCTGCTGAATGCCCCAACAGTGAAACAAACAATCCTAAGACTAAGGTTTGTCACATCGATTGCAACAAACCTATTTGCAGGGCTGTCTGCAGAAGTCGCAAGCCAAACTGCAATGCACCAGGATCAGGATGCTATGATCCCCGTTTCATTGGTGGAGATGGTAGAGTCTTCTATTTCCACGGAAAGAGCAATCAACACTTCTCCTTAGTCTCTGACTCCAACCTTCAAATCAATGCACGGTTCATTGGACACAGGCCTTCTAGCAGAAGCCGTGACTACACATGGATTCAAGCCCTTGGAATCCTCTTCAACTCCAAAACCTTCTCACTTGAAGCAACCAAGACACCCCAATGGAATGGTGAACTTGACCACTTCAAATTCAACTACAACGGGAACCAAGTAGCCCTAGCTGAAGGCTCTCTCTTCGCTTGGTACAGTGAAGAAAAAGACATAAAGCTTGAGAGAGTGGCAAGCAAGAACAGTGTGATGGTTACAGTGAAGGAAGTGGCTGAAATATTGGTGAATGTTGTGCCAGTAACCAAAGAGGATGACAGAATTCACAACTACCAAGTGCCCTCTGATGACTGTTTTGCTCACTTGGAAGTGCAGTTCAGGTTCTTTGCTTTGTCCCAAAAAGTTGATGGTGTGCTTGGAAGGACTTATAGGTTGGATTTTGAGAACCCTGCAAAGGCTGGTGTGGCTATGCCTGTTGTTGGTGGAGAGGACAAATACAAGACTAACTCATTGCTCTCTTCTGATTGTGCTTCTTGTATCTTCTCACATGAGAAAGAGACCACTACTCCTCAAGTCATGGAATATGGCACCCTTGATTGCACCAAGTTTTCATATGGCTTGGGAATCGTTTGCAGGAAATGA 1011 0.4471 MEISKRSSLLIFLVVFVSSMTHAKAYKSLQCSTRGTRCYGKYITCPAECPNSETNNPKTKVCHIDCNKPICRAVCRSRKPNCNAPGSGCYDPRFIGGDGRVFYFHGKSNQHFSLVSDSNLQINARFIGHRPSSRSRDYTWIQALGILFNSKTFSLEATKTPQWNGELDHFKFNYNGNQVALAEGSLFAWYSEEKDIKLERVASKNSVMVTVKEVAEILVNVVPVTKEDDRIHNYQVPSDDCFAHLEVQFRFFALSQKVDGVLGRTYRLDFENPAKAGVAMPVVGGEDKYKTNSLLSSDCASCIFSHEKETTTPQVMEYGTLDCTKFSYGLGIVCRK 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0653 336 Pfam Root cap 248 304 IPR009646 -
Aed1g0653 336 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 3 336 - -
Aed1g0653 336 PANTHER CONSTITUENT OF CELL WALL, PUTATIVE-RELATED 3 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0653 Aed-Chr1 7843999 7845276 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0653 - - gmx:100803458 622.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0653 1 7843999 7845276 Aed1g0653 1 7843999 7845276 ECH