Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0647 ATGGAGGTGCGAAACGCGCGTTGCTCGTTGTTGTCGTTTGGTGATACGGTGTGTCGTCGCGGGTGCGTGTGGTTAATTTGGTGTGCTTCGGAGACAACGCGAGAAGAGCGTGGTGTTGGAATTGGAGTATTAATGTTGAGATCCAGCATGGCGAACTTCCTCGCTCAGTTCCAAACAATTAAGAACTCCTCCGATCGCCTCGTCATTTCAGTGGAGGATGTGAGTAACTTGTGGCCGACTGTCAAGCCTGCTTTTGAGGAACGATTGCCTTACAAACGGGCAACTTTGAATAACAAGACGCGGAACCCTGTCTTTGTTGACACATTGCCAGCCGAGTTCATATTAACTACCGATTCAAGACTCCGTAGCCGGTTCCCTCAGGAACAATTTTTATTTTGGTTCCGAGAGCCGTATGCAACTATTGTACTTGTCAGCTGTGAGGATCTGGATGAGTTTAAAACCATCCTTAAACCACGCTTGAAATTAATTGTTCAAAATGATGAAAGGGAGTGGTTTGTAGTATATGTATCTAAAGCTCATCCAGCTAATGATCAGGCAAGCAAAATGGCAAAGAAAGTATATGCTAAACTTGAAGTTGAGTTTAACACCAAAAAAAGAGAAAGATGCTGCAAATATGATATGCATTTCCCTGAAGCAAACTTTTGGGAGGATCTAGAATCAAAGATAATGGAATGCATCAGAAATACCCTGGATAGGCGTGTACAATTTTATGAGGATGAGATACGTAAGCTCAGTGAACAGCGCCTCATGCCAGTCTGGAACTTCTGCAACTTTTTCATTCTGAAGGAAAGCTTGGCTTTTATGTTTGAAATGGCTCACCTTCATGAAGATGCCTTACGGGAATATGACGAATTAGAACTCTGCTATCTTGAAACAGTCTGGGTAACAACTGCTTGCTTGGCTTTAATTGAAGCAACCACTTCTAATTATAATGATGAACAAGTGGCGCCTGACATAGAGAAGGAGTTCTTTCGTCTGCTGGGTGACCTATATTCTCGAGCTAGAGTTAAGTTCATGAGGCTTGCCTATTTAATTGGGTATGGAACTGATATAGAAAGAAGTCCTGTCAACAGCAGTGCATCTCTCAGCTTGCTACCTTGGCCTAAGCCAGCTGTCTGGCCTTCAGTTCCTGCTGATGCATCAACAGAGGTGCTTGAGAAAGAAAAGTTGATTCTACAAACAACTTCTAGAACCAAACACTTTAATATCCAGAGGAAACCCCTGCCTCTTGAACCTACTGTTCTTCTACGAGAGGCCAACAGGCGGAGGGCTTCCCTTTCAGCTGGAAATGTGTCTGAAATGTTTGACAGTCGCCAGGGTCCAATGGATGGATCAGGTTTGGATGCATCCTCAAGAATGTCACCACACAAAGCACTTGCAAGTTCCATGTCTCGTACAAATTCTTCGCCAGGAAACTTTGATAGCTCAATTGACCGACCGATGAGACTTGCTGAGATTTTTATTGCTTCTGAGTATGCTTTGAAGCAAACAATTTCTAATCCTCAACTGTGGAAATCATTATCATCATCTGAGGAATTTGAGCAAAAATATTTAGAGCTAACTAAAGGTGCTGCAGACAATTATCATCGTTCCTGGTGGAAAAGACACGGTGTTGTCCTTGATGGTGAGATAGCAGCTGCAGCTTTTAAGCATGGACATTTTGATCAAGCTGCAAAGTCATATGAGAAGGTTTGTGCACTGTATTCTGGTGAAGGATGGCAGGATTTGTTGGCTGAGGTCCTTCCCAGTTTAGCTGAGTGTCAGATGATACTTAATGATCAAGCTGGCTACTTATTATCTTGTGTGAGGTTACTTTCTCTTGATGAAGAATTATTTTTGACCAAGGAGCGTCAAGCCTTTCAGTCAGAAGTTTTGCGTCTTGCTCATAGTGAAATGAAGGACCCTGTACCTCTTGATGTATCATCATTAATTACATTTTCTGGAAATCCTGGGCCTCCATTGGAGTTATGTGATAAGGATCCTGGTATCCTTTCTGTAACTTTATGGAGTGGTTTTCCGGATGATATAACTCTTGATTCAATCAGTCTTACATTAAATGCAACATATAATACTGATGAAGGTGTAAAGGTTTTCAAACCTAGAGCCCTTGTTGATCTCGATGCTGCTGTTTCATCTGCTTTGTTGATAAATGAAGACCAATGGATTGGCATTTTAGTTCGACCAGTAAATTACTCCCTCAAAGCTGCTGTCTTGCATATTGATACTGGTCCAGGGTTGGAGATTAAAGAGTCAAACATAATTGAGATGGAAAGCGATGTTGGTGTATCACAGAATGATAATGACCAGGTGCAGAATGATGGTGCTCAGATAAGAACTTTAAATTCTGATAAAAAATTTGAACGTTTGACTCTTCATGATGGTAAAATAGAATTTCCAAATTGGGCAAGTGACACTCCTTCTATTCTTTGGGTTCTGGTTCATGCCATCAGTGACACACTCAGCAGAGGCTCTTCTTCAGCCACAACAAGGAGAGAAAGTATTGTAGATGGAATGAGAACTATAGCTCTGAAACTTGAATTTGGAGCATTCCACAATCAGATATTTGAAAGGACCCTAGCAGTGCATTTTACATATCCTTTCTATGTGAGCACACGTGTTACTGATAAATGCAATGATGGGACCTTGCTTCTGCAGGTAATACTTCACTCTGAAGTAAAGGCTACACTGACCATATATGATGCCTGGCTTGATCTTCAAGATGGATTTGTTCATACTGGACAAACTGAGGGTAGACCCAATTCAAGTTTCTTCCCACTAATCATATCGCCCACTTCCAAAGGAGGAATATTGTTTAGTATCTGTCTAGACAGGACAAATGCAGAAGAAGCCAGGAAGCAACCAGAAAGCATATTAAATATTAAATATGGAATTTCTGGCAATAGAACAATTGGAGCCCACCCTCCTGTCGTGAATGAATCTACTGGAGTTAATGGTGCCAGACAGGAGTTAATCTTCAGGAGTGCAATTACTTTGCAAAGACCTGTGCTTGATCCATGCCTAGCTGTTGGTTTTCTTCCTCTCCCTTCAGATGGCCTAAGAGTTGGACAACTAGTTAAGATGCAATGGAGAGTGGAAAGGTTAACGGATTTGGACAAGGAAGGAGTTTCTAAACAGAATGATGAGGTGCTATATGAGGTAAATGCAAATTCTGGAAATTGGATGATAGCCGGGAGGAAAAGAGGATATGCATCTCTGTCCACAAAACAAGGCGCGAGAATAGTTATCTCAGTATTATGCATGCCACTGGTGGCTGGTTATGTTCGCCCTCCGGTACTTGGGCTGCCAGATGTTGATGAGGGAAATATAAGCTGCAAACCTGCTGGGCCACATCTGGTTTGTGTTTTGCCACCACCCCTCAGCTCCTCCTTCTGCATCCCAGTTATTTCATGA 3432 0.4222 MEVRNARCSLLSFGDTVCRRGCVWLIWCASETTREERGVGIGVLMLRSSMANFLAQFQTIKNSSDRLVISVEDVSNLWPTVKPAFEERLPYKRATLNNKTRNPVFVDTLPAEFILTTDSRLRSRFPQEQFLFWFREPYATIVLVSCEDLDEFKTILKPRLKLIVQNDEREWFVVYVSKAHPANDQASKMAKKVYAKLEVEFNTKKRERCCKYDMHFPEANFWEDLESKIMECIRNTLDRRVQFYEDEIRKLSEQRLMPVWNFCNFFILKESLAFMFEMAHLHEDALREYDELELCYLETVWVTTACLALIEATTSNYNDEQVAPDIEKEFFRLLGDLYSRARVKFMRLAYLIGYGTDIERSPVNSSASLSLLPWPKPAVWPSVPADASTEVLEKEKLILQTTSRTKHFNIQRKPLPLEPTVLLREANRRRASLSAGNVSEMFDSRQGPMDGSGLDASSRMSPHKALASSMSRTNSSPGNFDSSIDRPMRLAEIFIASEYALKQTISNPQLWKSLSSSEEFEQKYLELTKGAADNYHRSWWKRHGVVLDGEIAAAAFKHGHFDQAAKSYEKVCALYSGEGWQDLLAEVLPSLAECQMILNDQAGYLLSCVRLLSLDEELFLTKERQAFQSEVLRLAHSEMKDPVPLDVSSLITFSGNPGPPLELCDKDPGILSVTLWSGFPDDITLDSISLTLNATYNTDEGVKVFKPRALVDLDAAVSSALLINEDQWIGILVRPVNYSLKAAVLHIDTGPGLEIKESNIIEMESDVGVSQNDNDQVQNDGAQIRTLNSDKKFERLTLHDGKIEFPNWASDTPSILWVLVHAISDTLSRGSSSATTRRESIVDGMRTIALKLEFGAFHNQIFERTLAVHFTYPFYVSTRVTDKCNDGTLLLQVILHSEVKATLTIYDAWLDLQDGFVHTGQTEGRPNSSFFPLIISPTSKGGILFSICLDRTNAEEARKQPESILNIKYGISGNRTIGAHPPVVNESTGVNGARQELIFRSAITLQRPVLDPCLAVGFLPLPSDGLRVGQLVKMQWRVERLTDLDKEGVSKQNDEVLYEVNANSGNWMIAGRKRGYASLSTKQGARIVISVLCMPLVAGYVRPPVLGLPDVDEGNISCKPAGPHLVCVLPPPLSSSFCIPVIS 1143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0647 1143 Coils Coil 234 254 - -
Aed1g0647 1143 PANTHER BNAC09G30770D PROTEIN 300 703 - -
Aed1g0647 1143 PANTHER BNAC09G30770D PROTEIN 50 300 - -
Aed1g0647 1143 PANTHER BNAC09G30770D PROTEIN 702 1141 - -
Aed1g0647 1143 Pfam Trafficking protein particle complex subunit 10, TRAPPC10 1025 1103 IPR022233 -
Aed1g0647 1143 PANTHER EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1 300 703 IPR045126 GO:0048193|GO:1990071
Aed1g0647 1143 PANTHER EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1 50 300 IPR045126 GO:0048193|GO:1990071
Aed1g0647 1143 PANTHER EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1 702 1141 IPR045126 GO:0048193|GO:1990071
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0647 Aed-Chr1 7783502 7795113 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0647 K20307 - qsu:112030668 1168.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0647 1 7783502 7795113 Aed1g0647 1 7783502 7795113 ECH