Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0646 ATGGCGTCGGTCCACAGCACCGTCGCTCCCCGCACCTTCCTGCCGTCGATTCCCAAGCCGAAAGCTCCTCACGCCGCGAAATCCGTCGCCGCCGGCGCGCACAACTTTCCGGCCGCGAGATTTTCGGGCAGCCTCATTCTCTCCGGAAATAAACGCGCAGTGGCGGCGAACTCGGCTGCGGAGGAGTTGGACGTGATATTGGTGCAAAGCGACGACATTACCGACCAGCAGGAAGGTTTGGTGGTGAGTCACGTCGAGATGGAAGGCGGAGACGGCGAATTGGCGACGCAGGTGAGCGGATTCGGAGCGAGCGACGGTTTGTTGTCGTTGGACGGGTTTTCTTCTTCGTCTTCTTCGGCGTTGGTTGGGAGTGAGAGCGAGGAGGACATAGAGAAGCTGATTGATAGAACTATCAATGCAACTATTGTGCTCGCCGCTGGTACTTTCGCCATCTCCAAAATCCTCACCATTGATAGCGATTACTGGCATGGATGGACCCTATTTGAGATAATAAGATATGCGCCTCAGCACAACTGGACTGCGTATGAGGAAGCTCTTAAGACGAATCCAGTTCTTGCCAAGATGATGATTAGTGGGATTGTTTACTCCTTAGGGGACTGGATTGCGCAGTGCTTTGAAGGAAAACCTCTGTTTGAGTTTGACCGTGCGCGGATGTTGAGATCAGGGCTTGTTGGTTTTACTCTTCATGGTTCTCTTTCTCATTTCTATTATCAGTTTTGCGAGGAGCTATTTCCTTACAAAGAATGGTGGGTAGTTCCTGCCAAAGTTGCCTTCGATCAAACTGCATGGTCAGCACTTTGGAACAGCATATATTACACTGTTGTTGCAGTACTGCGTCGTGATGATCCTATCAGTATTTTCAATGAATGGAAGGCAACGTTTTTTCCCATGCTGACGGCAGGATGGAAGCTATGGCCATTTGCCCATCTCATTACTTACGGTGTGATACCGGTTGAGCAAAGGCTTCTCTGGGTGGATATCATAGAGCTAGTTTGGGTGACCATACTTTCAACATTTTCAAATGAAAAATCAGAAGCAAGAAACACTCAGTCTTTGGCGCCTTCAGAAGTGAAATCCACCACATCTGTTCATCATCCTGAGGAGTAG 1128 0.4973 MASVHSTVAPRTFLPSIPKPKAPHAAKSVAAGAHNFPAARFSGSLILSGNKRAVAANSAAEELDVILVQSDDITDQQEGLVVSHVEMEGGDGELATQVSGFGASDGLLSLDGFSSSSSSALVGSESEEDIEKLIDRTINATIVLAAGTFAISKILTIDSDYWHGWTLFEIIRYAPQHNWTAYEEALKTNPVLAKMMISGIVYSLGDWIAQCFEGKPLFEFDRARMLRSGLVGFTLHGSLSHFYYQFCEELFPYKEWWVVPAKVAFDQTAWSALWNSIYYTVVAVLRRDDPISIFNEWKATFFPMLTAGWKLWPFAHLITYGVIPVEQRLLWVDIIELVWVTILSTFSNEKSEARNTQSLAPSEVKSTTSVHHPEE 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0646 375 Pfam Mpv17 / PMP22 family 285 344 IPR007248 GO:0016021
Aed1g0646 375 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 112 368 IPR007248 GO:0016021
Aed1g0646 375 PANTHER PEROXISOMAL MEMBRANE 22 KDA FAMILY PROTEIN 112 368 - -
Aed1g0646 375 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0646 Aed-Chr1 7780490 7783684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0646 182 350 Miscellaneous Gene Families AT2G14860 24.852 3.12e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0646 K13348 - gmx:100805057 631.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0646 1 7780490 7783684 Aed1g0646 1 7780490 7783684 ECH