Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0636 ATGCAACGTAACATGGCAATGAGCTTCTTCCAACGCAGGTTCTTGAGCCAGCAAAGAAGAACAACAACACAAACGATTGCAAGCTTAAGGCGAGTGGTGGAGCCATGTGACGTGTTCCTGAACCACAGGTGCATGGACACGAAGAAAACAGTGGCCACTTTGCTCTACGACCATTTGAAAAGGCACGGCTTCTACCCTTTCTTGGACAACAAAAACATGAAGCCGGGGGACAAGCTGTTCGAGAAAATCAACAGAGCCGTCATGGAGTGCAAGATCGGCGTGGCGGTTCTCTCGCCGCGCTACGCCGACTCCTACTTCTGCCTCCATGAGCTTGCGCTTCTTCTCGCGTGCAACAAGAAGGTCATTCCCATCTTCTGTGATGTTAAGCCCTCGCAGCTGCGAGTTGTTAATAACCCTAAATGGACTGAAGATGAAGTTAGACGCTTCAGGTTGGCTCTTGAGGAGGTTAAGTTCACCGTTGGACTCACGTTCAACTCTTCCAAAGGGAACTTGTCCGAAATTGTGAATAATAGTACTGACATCATCATTGGCAGCATGATAGAGCTCGAGAATGAAGAGCGGATGCAGCGTAAAAACTTACCAATTCCTCTCTAG 615 0.4862 MQRNMAMSFFQRRFLSQQRRTTTQTIASLRRVVEPCDVFLNHRCMDTKKTVATLLYDHLKRHGFYPFLDNKNMKPGDKLFEKINRAVMECKIGVAVLSPRYADSYFCLHELALLLACNKKVIPIFCDVKPSQLRVVNNPKWTEDEVRRFRLALEEVKFTVGLTFNSSKGNLSEIVNNSTDIIIGSMIELENEERMQRKNLPIPL 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0636 204 SUPERFAMILY Toll/Interleukin receptor TIR domain 36 160 IPR035897 -
Aed1g0636 204 PANTHER TOLL-INTERLEUKIN-RESISTANCE (TIR) DOMAIN FAMILY PROTEIN 26 198 - -
Aed1g0636 204 ProSiteProfiles TIR domain profile. 34 182 IPR000157 GO:0007165
Aed1g0636 204 Gene3D - 2 157 IPR035897 -
Aed1g0636 204 PANTHER COP1-INTERACTING PROTEIN-RELATED 26 198 - -
Aed1g0636 204 Pfam TIR domain 37 134 IPR000157 GO:0007165
Aed1g0636 204 SMART till_3 35 163 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0636 Aed-Chr1 7705635 7706562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0636 23 162 Miscellaneous Gene Families AT1G57830 30.864 2.05e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0636 - - gmx:100784606 353.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0636 1 7705635 7706562 Aed1g0636 1 7705635 7706562 ECH