Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0632 ATGGCTCTCCAAGCTGCTTCTCTTGTTCCTGCTTCTTTCTCCGTTCTTAAAGAGGGAAAGAGTGGTGTATCTCTCAAGGACTCCACACTGTTCGGTCTTTCATTGTCAGAACCTCTCAAAGCTGACTTCAGCTCCTCTGCATTGAGGTGCAAGAGGGATTTCCAACAAAAAACTGGTGCTGTGAGGGCCGAGACAACGGCTACAGCCTCTCCAGCAGTTACCAAGTCTACACCAGAAGGCAAGAAAACATTGAGGAAGGGCAGTGTTGTGATAACTGGTGCCTCCTCTGGACTAGGCCTTGCCACTGCCAAGTCTTTGGCTGAGACAGGAAAATGGCATGTAATAATGGCCTGCAGGGATTACCTCAAAGCTGCAAGAGCTGCGAAATCTGCTGGCATAGCTAAGGAAAACTACACCATCATGCACTTGGACCTTGCCTCTCTCGAAAGTGTCCGCCAATTCGTTGATAACTTCAGAAGATCAGAAATGCCGCTGGATGTGCTGGTTTGCAATGCTGCTGTTTACTTGCCAACTGCCAAGGAACCTACATTCACTGCTGAAGGCTTTGAACTTAGTGTTGGAACAAACCATCTGGGGCATTTCCTCCTCGCGCGTCTCTTGCTTGAGGACTTGAGCAAATCTGATTACCCTTCTAAGCGTTTGATCATTGTCGGTTCAATCACAGGGAACACAAACACATTGGCTGGTAATGTACCTCCCAAGGCTAACCTTGGTGACCTGAGGGGACTTCAGGGTGGTTTGAATGGGCTAAACAGTTCAGCCATGATTGATGGTGGAGACTTTGATGGTGCCAAGGCATACAAGGACAGCAAAGTCTGCAACATGCTCACGATGCAAGAGTTCCACAAACGATACCACGAGAAAACTGGAATCACATTCGCTTCGCTCTACCCTGGTTGCATTGCCACAACAGGCTTATTCAGAGAGCACATTCCCTTGTTCAGGACTCTATTCCCTCCATTCCAGAAGTACATAACCAAGGGCTATGTCTCAGAAGATGAAGCAGGAAAGAGACTTGCTCAGTTGTCACAGGAGGCCAGTGATGCAGAGAAGGCTCGTAAGGTCTGGGAGGTTAGTGAGAAACTCGTTGGTTTGACCTAA 1122 0.4831 MALQAASLVPASFSVLKEGKSGVSLKDSTLFGLSLSEPLKADFSSSALRCKRDFQQKTGAVRAETTATASPAVTKSTPEGKKTLRKGSVVITGASSGLGLATAKSLAETGKWHVIMACRDYLKAARAAKSAGIAKENYTIMHLDLASLESVRQFVDNFRRSEMPLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHFLLARLLLEDLSKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLQGGLNGLNSSAMIDGGDFDGAKAYKDSKVCNMLTMQEFHKRYHEKTGITFASLYPGCIATTGLFREHIPLFRTLFPPFQKYITKGYVSEDEAGKRLAQLSQEASDAEKARKVWEVSEKLVGLT 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0632 373 Gene3D - 73 373 - -
Aed1g0632 373 PANTHER - 349 372 IPR005979 GO:0016630
Aed1g0632 373 PANTHER - 1 349 IPR005979 GO:0016630
Aed1g0632 373 Pfam short chain dehydrogenase 89 231 IPR002347 -
Aed1g0632 373 CDD LPOR_like_SDR_c_like 86 372 - -
Aed1g0632 373 Coils Coil 339 366 - -
Aed1g0632 373 PRINTS Glucose/ribitol dehydrogenase family signature 88 105 IPR002347 -
Aed1g0632 373 PRINTS Glucose/ribitol dehydrogenase family signature 163 174 IPR002347 -
Aed1g0632 373 PRINTS Glucose/ribitol dehydrogenase family signature 296 313 IPR002347 -
Aed1g0632 373 PANTHER NADPH-PROTOCHLOROPHYLLIDE OXIDOREDUCTASE 349 372 - -
Aed1g0632 373 PANTHER NADPH-PROTOCHLOROPHYLLIDE OXIDOREDUCTASE 1 349 - -
Aed1g0632 373 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 84 349 IPR036291 -
Aed1g0632 373 TIGRFAM LPOR: light-dependent protochlorophyllide reductase 85 349 IPR005979 GO:0016630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0632 Aed-Chr1 7633481 7636266 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0632 K00218 - gmx:100785637 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0632 1 7633481 7636266 Aed1g0632 1 7633481 7636266 ECH