Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0631 ATGTTGGCCATTTTCCACCAGGCTTTTGCTCATCCACCTGAAGAGCTGAACAGTCCTGCATCTTACAAAGGTTCCAAGAAGCCTAAGGTTCCTGAGGAAACTCTCAAGGATTTCCTGGCACACCATCCTAACAACACTTGCTCTATGAGCTTTGGTGATGCTGCTGTTCTAGCTTATGTCCGTCCTGATCAAGCTTTCTCACGCCATCAAAGCTTGAACAATTTGTCCATACTCAACAAGCAATATGGTTTGTCAAAGAGCACTGATGAGGCCATGTTTGTGATTGAAGCTTATAAGACACTTCGTGACAGGGGTCCGTACCCTGCAGATCAAGTTGTCAAGGAACTTGATGGCAGCTTTGCCTTTGTTGTCTATGACAGCAAGGTTGGCAGTGTCTTTGCAGCACTGGGTTCTGATGGAGGAGTGAAGCTGTATTGGGGTATTGCAGCTGATGGATCTGTGGTGATCTCCGATGATCTTGAAGTCATAAAAGAGGGTTGTGCCAAATCCTTTGCTCCCTTTCCAACAGGGTGTATGTTTCACAGTGAAGGAGGTTTGGTGAGCTTTGAGCATCCAATGAACAAGTTGAAGGCAATGCCAAGAGTGGACAGTGAAGGGGCCATGTGTGGGGCCAACTTCAAAGTTGATAAGTTCGCCAGAGTAAATAGCATTCCTCGAGTCGGAAGTCAATCCAATTGGATGGAATGGGACCAACATCAAAATTTGTACACTGCACTTTACAGTTTACACCGTTGGTCGGAGATGGCAGATCGCTTCTTTCCGAACGAGCTGCCACGCTTCGTGACAGAGACCACAGACCAAACTCTGTCAACAGACTCTCTCACCGCTCTTCTCTCTCTTCCTTACCAAACTCTCTCTGCAAAGTTCCAAGCATCTGCATTTCACCTGAAACAATCGGTGGTGAGAGAGATATGGGGGTCACGTGGGAAGCGTGTGAAGGACTATACACTTTACACGGGGGCTCTGGGGACAGCATACTTGCTTTTCAAGGCCTACCAAGTAACCAAGGATGGGAATGATCTTAGCTTGTGCTCAGAGATTGTTAAGGCTTGTGATTCTGCTTCAGCAGATTCTGGGTACTCCCTCTTTCGTGCATCACAGGCTACTCATACTGGTGATGAAAGACTACTTGACTATTACCTGAGACAATTCAAAGAGATTGCAATGCCTCGTGATTTGCCCTATGAGCTATTGTATGGCAGAGCAGGTTACTTATGGGCTTGTTCATTCTTAAACAAGCATATTGGTAACAACACAATATCTACTACTCACATGAGATCAGTTGTGGATGAAGTTATTATGGCCGGCAGACAATTAGGTCGCAAGGGACGATGTCCTCTGATGTATGAATGGCATGGGAAGAACTACTGGGGTGCTGCTCATGGACTTGCAGGAATTATGCATGTTTTGATGGACATGGAACTTAAGCCAGACGAGGTGGAAGATGTCAAGGGTACACTACTATACATGATTAACAATCGTTTCCCTAGTGGCAATTATCCCTCCAGTGAAGGAAGTGAAAATGACCGTCTTGTTCATTGGTGTCATGGTGCTCCTGGACTCACTCTTACCCTTGTAAAGGCAGCTGAGGTTTTTGGGGACAAGGAATTTTTGCAAGCAGCTGTAGAAGCAGGGGAAGTAGTATGGAAGAGGGGTCTGCTTAAGCGAGTGGGGATCTGCCATGGCATCAGTGGGAACACCTATGTCTTTCTTTCCCTTTACAGATTGACAGGAAATGAGGAGTACTTGTACAGGGCCAAAGCATTTGCTTGTTTCCTACTTGATAGGGCACAAAAACTGATTTTAGAAGGAAATATGCATGGAGGAGATCGCCCCTATTCCTTGTTTGAAGGTCTTGGAGGAATGGCATATACTTTTCTAGACATGGTTGATCCAGAATTGGCAAAGTTCCCAGGCTATGAACTTTGA 1950 0.4579 MLAIFHQAFAHPPEELNSPASYKGSKKPKVPEETLKDFLAHHPNNTCSMSFGDAAVLAYVRPDQAFSRHQSLNNLSILNKQYGLSKSTDEAMFVIEAYKTLRDRGPYPADQVVKELDGSFAFVVYDSKVGSVFAALGSDGGVKLYWGIAADGSVVISDDLEVIKEGCAKSFAPFPTGCMFHSEGGLVSFEHPMNKLKAMPRVDSEGAMCGANFKVDKFARVNSIPRVGSQSNWMEWDQHQNLYTALYSLHRWSEMADRFFPNELPRFVTETTDQTLSTDSLTALLSLPYQTLSAKFQASAFHLKQSVVREIWGSRGKRVKDYTLYTGALGTAYLLFKAYQVTKDGNDLSLCSEIVKACDSASADSGYSLFRASQATHTGDERLLDYYLRQFKEIAMPRDLPYELLYGRAGYLWACSFLNKHIGNNTISTTHMRSVVDEVIMAGRQLGRKGRCPLMYEWHGKNYWGAAHGLAGIMHVLMDMELKPDEVEDVKGTLLYMINNRFPSGNYPSSEGSENDRLVHWCHGAPGLTLTLVKAAEVFGDKEFLQAAVEAGEVVWKRGLLKRVGICHGISGNTYVFLSLYRLTGNEEYLYRAKAFACFLLDRAQKLILEGNMHGGDRPYSLFEGLGGMAYTFLDMVDPELAKFPGYEL 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0631 649 PANTHER LANC-LIKE PROTEIN GCL2 255 649 - -
Aed1g0631 649 SMART DUF3700_2 2 215 IPR024286 -
Aed1g0631 649 PRINTS Eukaryotic LanC-like protein family signature 580 598 IPR020464 -
Aed1g0631 649 PRINTS Eukaryotic LanC-like protein family signature 535 556 IPR020464 -
Aed1g0631 649 PRINTS Eukaryotic LanC-like protein family signature 498 513 IPR020464 -
Aed1g0631 649 PRINTS Eukaryotic LanC-like protein family signature 452 464 IPR020464 -
Aed1g0631 649 PRINTS Eukaryotic LanC-like protein family signature 256 269 IPR020464 -
Aed1g0631 649 Pfam Aluminium induced protein 2 215 IPR024286 -
Aed1g0631 649 SMART LANC_like_2 318 649 IPR007822 -
Aed1g0631 649 PANTHER LANC-LIKE PROTEIN 255 649 - -
Aed1g0631 649 Pfam Lanthionine synthetase C-like protein 319 649 IPR007822 -
Aed1g0631 649 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 68 189 IPR029055 -
Aed1g0631 649 Gene3D - 251 649 IPR012341 GO:0005975
Aed1g0631 649 PRINTS LanC-like protein superfamily signature 402 417 IPR007822 -
Aed1g0631 649 PRINTS LanC-like protein superfamily signature 321 339 IPR007822 -
Aed1g0631 649 PRINTS LanC-like protein superfamily signature 619 636 IPR007822 -
Aed1g0631 649 PRINTS LanC-like protein superfamily signature 518 538 IPR007822 -
Aed1g0631 649 PRINTS LanC-like protein superfamily signature 463 479 IPR007822 -
Aed1g0631 649 PRINTS LanC-like protein superfamily signature 564 577 IPR007822 -
Aed1g0631 649 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 74 182 IPR029055 -
Aed1g0631 649 SUPERFAMILY LanC-like 318 649 - -
Aed1g0631 649 CDD euk_LANCL 324 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0631 Aed-Chr1 7627516 7632718 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0631 - - gmx:100786158 720.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0631 1 7627516 7632718 Aed1g0631 1 7627516 7632718 ECH