Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0628 CACTCACCCGTTATTAGTAAGGCGCCATCTCTGGCCTCCGTCACTCCCTGTCTCCCTCACACCACCGCGCTAGCCTCAACTCACACCGCAACAAGCGAAGACGACGACGTTTGTTCCGCGTTTGACATTTATATCACTCCAGTCTCCAGGATTTGCCATGGTGTGTCAGTTTTTACTTGCAAATTGCGATCTATGAGCAGGAATATGGAGGCAAATGCAGCTTCACACGATCGCGAGGATCAAGATGAATATGTTTTACTTAACTTGGATGGTGTTTCTGACCTAATTGTTATTCCACCAAATGCAAAGTATGTTCTTACTGGCCTTGATACATTAAACCCAGTACTGATTATTGATGACAAATTCAAGCTGATTGGGGAATATGAGGAGACAATTGGCACATGTCTTGCTTTTACAGAGCAAGATGCCCCTGTGGTTCATGAAGAGACTGGACCATCTGAAGTGAACCTTTTCTCCGGAACAAGACTAATTGATTCAAATCAACCTCCATCAAAGCAAGTAAAACCTGTGTGTCAGCTTCACAAGGTTCTCAAGTTTAAACTATCTCCTGATTCTGAAATTCACGTCACAGCTGAGGAGGCGAAATGA 609 0.4417 HSPVISKAPSLASVTPCLPHTTALASTHTATSEDDDVCSAFDIYITPVSRICHGVSVFTCKLRSMSRNMEANAASHDREDQDEYVLLNLDGVSDLIVIPPNAKYVLTGLDTLNPVLIIDDKFKLIGEYEETIGTCLAFTEQDAPVVHEETGPSEVNLFSGTRLIDSNQPPSKQVKPVCQLHKVLKFKLSPDSEIHVTAEEAK 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0628 202 Coils Coil 198 202 - -
Aed1g0628 202 Pfam TFIIIC subunit triple barrel domain 79 186 IPR019481 -
Aed1g0628 202 Gene3D - 70 190 - -
Aed1g0628 202 PANTHER TRANSCRIPTION INITIATION FACTOR IIIC TFIIIC , POLYPEPTIDE 6-RELATED 71 192 IPR042771 GO:0006383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0628 K15203 - gmx:100782116 242.276
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0628 1 7590757 7593170 Aed1g0628 1 7590757 7593170 ECH