Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0623 ATGGCGAAGAAGAAGGAGAAGAAGGTGAACGTCTCGGGAAAACCTAAGCACTCTCTAGATGTGAACCGCAGCAATGAGGCAAAGAATGAGTCGCGCTCCGCCGCCACAGTGCGCCGTCTCAAGATGTACAAAACCAGGCCCGTTCGCGACCGGAAGGGAAAAGTCCTCTCCAACGAGTATCAGTCCAAGGATCTTCCCAGCACTAGAATCCAACCTGATCGTCGATGGTTCGGGAACACGCGTGTTGTGAATCAGAAGGAGCTCGAGTTTTTCCGAGAAGAGTTGCAGAGCCGCATGTCGAGTAATTACAATGTCATTCTGAAGGAGAAGAAACTGCCGCTGTCACTGCTCAACGATCACCAGAAGCAAACTAGGGTTCACCTGCTTGATAGGGAGCCTTTCAAGGATGCGTTTGGACCTAAGACTAAGAGGAAGCGCCCTAGCCTCATGGCGTCTGACTACGAGTCCTTGCTGAAGAAAGCTGATGGTTCTCATGAAGCTTTTGAAGAGAAGTATGGTTCCGGTGGATCTGCAGAAGCTAATGATGAAGATGGATTTAGAGATTTAGTGCGGCATACCATGTTCGATAAGGGTCAAAGTAAACGCATATGGGGTGAGCTTTACAAAGTGATAGATTCTTCAGATGTTGTTGTCCAGGTTCTAGATGCAAGGGACCCACAAGGCACAAGATGTTACCATTTAGAGAAGCATTTGAAGGAAAATTGTACGCACAAACACATGGTTCTTTTATTGAACAAGTGTGATCTTGTTCCTGCTTGGGCAACAAAAGGATGGCTTAGAGTTTTGTCAAAAGAATATCCAACTCTTGCATTCCATGCAAACATTACCAAGTCATTCGGAAAAGGTTCACTTCTATCAGTTCTGAGACAATTTGCTCGATTGAAACGTGATAAGCAAGCAATATCTGTTGGATTTGTTGGATATCCAAATGTTGGGAAGTCATCAGTAATCAACACATTGCGCACAAAGAATGTCTGCAAGGTTGCTCCAATTCCAGGGGAAACAAAAGTCTGGCAGTATATAACCCTTACAAAGAGGATCTTTCTGATTGATTGTCCAGGTGTTGTCTACCACAACAAAGATTCTGAAACAGATGTAGTGTTAAAGGGTGTGGTGCGTGTTACTAATTTGAAAGATGCAGCAGACCACATAGGCGAGGTTTTGAAACGTGTGAAGAAAGAGAATTTGCAGAGGGCATATAAAATAAAAGAGTGGTATGTATATATGTACAAAACATTGGTTTTCATCAATATTTTTCTTGTCACCAGGGATGATGAAAATGACTTCTTACTTCAGCTTTGCAAAGCATCTGGCAAACTTCTCAGGGGTGGTGAGCCTGACCTGATGACGGCAGCAAAGATGATACTTCACGACTGGCAGAGGGGGCGGATTCCCTTTTTCGTTCCTCCTCCTAATCTGGATGACTTGGCTGAGGAACCTAATGTTAATGGTGTTAACTTGGATGAAGTTGATGGCAAAGTGGCTTCTGCTGCTATAAAGGCTATTGCAGATGTTCTTTCATCACAGCAGCAAACAAGTGTACCTGTTCAAAAGGATTTATATAGTGAGAATGAGTTGAAGGGGCAAGCTAATGACCAATTTCCAAACACCAATGCAAATGAAGAAATTCTGACCCATGAATCTGATAGTAACACATCTGAATAG 1686 0.4365 MAKKKEKKVNVSGKPKHSLDVNRSNEAKNESRSAATVRRLKMYKTRPVRDRKGKVLSNEYQSKDLPSTRIQPDRRWFGNTRVVNQKELEFFREELQSRMSSNYNVILKEKKLPLSLLNDHQKQTRVHLLDREPFKDAFGPKTKRKRPSLMASDYESLLKKADGSHEAFEEKYGSGGSAEANDEDGFRDLVRHTMFDKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLEKHLKENCTHKHMVLLLNKCDLVPAWATKGWLRVLSKEYPTLAFHANITKSFGKGSLLSVLRQFARLKRDKQAISVGFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYHNKDSETDVVLKGVVRVTNLKDAADHIGEVLKRVKKENLQRAYKIKEWYVYMYKTLVFINIFLVTRDDENDFLLQLCKASGKLLRGGEPDLMTAAKMILHDWQRGRIPFFVPPPNLDDLAEEPNVNGVNLDEVDGKVASAAIKAIADVLSSQQQTSVPVQKDLYSENELKGQANDQFPNTNANEEILTHESDSNTSE 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0623 561 Pfam 50S ribosome-binding GTPase 310 398 IPR006073 GO:0005525
Aed1g0623 561 Gene3D - 194 364 IPR027417 -
Aed1g0623 561 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 200 455 IPR027417 -
Aed1g0623 561 Gene3D - 365 475 IPR023179 -
Aed1g0623 561 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 204 365 IPR030378 GO:0005525
Aed1g0623 561 PANTHER NUCLEOLAR GTP-BINDING PROTEIN 2 2 549 IPR024929 GO:0005730
Aed1g0623 561 Pfam NGP1NT (NUC091) domain 42 166 IPR012971 -
Aed1g0623 561 PRINTS GTP1/OBG GTP-binding protein family signature 356 371 IPR006073 GO:0005525
Aed1g0623 561 PRINTS GTP1/OBG GTP-binding protein family signature 310 330 IPR006073 GO:0005525
Aed1g0623 561 MobiDBLite consensus disorder prediction 1 36 - -
Aed1g0623 561 PANTHER GTP-BINDING PROTEIN-RELATED 2 549 - -
Aed1g0623 561 MobiDBLite consensus disorder prediction 520 561 - -
Aed1g0623 561 CDD NGP_1 206 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0623 Aed-Chr1 7546572 7551161 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0623 K14537 - gmx:100781028 986.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0623 1 7546572 7551161 Aed1g0623 1 7546572 7551161 ECH