Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0617 ATGGCCACCGTGCAACTCCAATCCCTAACCCTCGTTCGCTCCTCCGCACTCCCTTCCGCTGCCTTTTCCCCTCCAATGGCCGTCTCCGGTCTCCGTAGCTCCTCCGCGCTGCCGCGGTATGCCGGTCTCCGGCTCCGTCCCGCCGCCGAGTCCAGCTTTCTGACTCGCGCCGGCTCGAGAGCCGCTCCTCGCGTCGGAGGTGTCAGGTGCGAGGCAGGAGACACCGCTGTTGATGTCGCTCCCATTACTGATGCAAATTGGCAATCACTTGTGATTGAATCTGAGACTCCTGTTCTGGTTGAATTCTGGGCTCCATGGTGTGGTCCTTGCCGTATGATCCACCCGATAATTGACGAGCTTGCAAAGGAATATGTTGGTAAGCTAAAGTGCTACAAACTCAATACTGATGAGAGCTCTACGACCGCTACTCGTTACGGGATTCGAAGTATCCCAACTGTCATTATTTTCAAGAATGGTGAGAAGAAAGACACAGTTATTGGAGCTGTGCCCAAGACAACATTGACCTCAAGCATAGAAAAATTCTTGTGA 549 0.5355 MATVQLQSLTLVRSSALPSAAFSPPMAVSGLRSSSALPRYAGLRLRPAAESSFLTRAGSRAAPRVGGVRCEAGDTAVDVAPITDANWQSLVIESETPVLVEFWAPWCGPCRMIHPIIDELAKEYVGKLKCYKLNTDESSTTATRYGIRSIPTVIIFKNGEKKDTVIGAVPKTTLTSSIEKFL 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0617 182 CDD TRX_family 85 179 - -
Aed1g0617 182 Gene3D Glutaredoxin 79 182 - -
Aed1g0617 182 SUPERFAMILY Thioredoxin-like 77 182 IPR036249 -
Aed1g0617 182 PANTHER THIOREDOXIN M-TYPE PROTEIN 1 182 - -
Aed1g0617 182 Pfam Thioredoxin 79 179 IPR013766 -
Aed1g0617 182 PANTHER GEO12009P1 1 182 - -
Aed1g0617 182 TIGRFAM thioredoxin: thioredoxin 83 181 IPR005746 GO:0015035
Aed1g0617 182 PRINTS Thioredoxin family signature 106 115 - -
Aed1g0617 182 PRINTS Thioredoxin family signature 146 157 - -
Aed1g0617 182 PRINTS Thioredoxin family signature 98 106 - -
Aed1g0617 182 ProSiteProfiles Thioredoxin domain profile. 70 182 IPR013766 -
Aed1g0617 182 ProSitePatterns Thioredoxin family active site. 99 117 IPR017937 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0617 Aed-Chr1 7498304 7501445 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0617 K03671 - gmx:100811845 323.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0617 1 7498304 7501445 Aed1g0617 1 7498304 7501445 ECH