Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0616 ATGCTTTTTTCCATAACCATGGAAGAACAACAACAAGAACCAAAGCTTCTGAACAACAAGGCCATGATATTGCACTTGCACACTCCTTCTCAAACAATCATGAGATTGGCCTCACTTGCCATCAGCTCCAACGTGCGGTTGAAATCATCAGACATGCCTGTCCACATGCAGGAACATGCTCTGCGCCACACCAGATCACTCTTCCCTACCCTTCACCCTCCTTCTCCAAACCCATCCAACACTCTCATAGCTAGAGCTCTCAAAAAGGAGTTTGATTCGAAGTATGGATTGGCGTGGCACTGCGTGATAGGGAAGAGTTTCGGGTCGTTTGTGAGTCACACGAGTGGAGGGTTCATCTACTTCTCAATTGACTCACTTTCTGTTCTTCTCTTCAAAACTGAGGTTCATTTGGTCACAACACAACCACCTACTACTTAA 438 0.4589 MLFSITMEEQQQEPKLLNNKAMILHLHTPSQTIMRLASLAISSNVRLKSSDMPVHMQEHALRHTRSLFPTLHPPSPNPSNTLIARALKKEFDSKYGLAWHCVIGKSFGSFVSHTSGGFIYFSIDSLSVLLFKTEVHLVTTQPPTT 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0616 145 SUPERFAMILY DLC 42 133 IPR037177 GO:0007017|GO:0030286
Aed1g0616 145 Pfam Dynein light chain type 1 45 133 IPR001372 GO:0007017|GO:0030286
Aed1g0616 145 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 37 133 IPR037177 GO:0007017|GO:0030286
Aed1g0616 145 SMART Dynein_light_2 40 133 IPR001372 GO:0007017|GO:0030286
Aed1g0616 145 PANTHER DYNEIN LIGHT CHAIN 15 140 IPR001372 GO:0007017|GO:0030286
Aed1g0616 145 PANTHER DYNEIN LIGHT CHAIN 15 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0616 Aed-Chr1 7494116 7496019 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0616 K10418 - gmx:100790593 239.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0616 1 7494116 7496019 Aed1g0616 1 7494116 7496019 ECH