Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0615 ATGGAGGAAGAGCAAGAGTTGAAGATCCCCGAAACCATCGTTTACGACACTATAAGTCCCCTCGCTCTCTCCGCCGCCGATTCCCCACTCTCCGACCACCCCGAATCCTACACCGTTTTCCGCAACGAAATTTCCCTCGAAACGCCCCAACGCGCCTCCCCCACCACCGCAACCGTCGATTTCTTCTCCCTCGACGTCGCCGCCGATACCTCCGCTGGCGACCCTTTCCCCGAGCCGCTCGCAGCCCCCGATCCGGAGACCCCGGCTCCTGAGCCGAAGCTCGAGAAGATAGTGGATTTTTGTGAGTTTTTGTCACCAACTGCAGAAGAGAAAGCTTCACGAGACCTGGCGATAGAGTCTGTGTTTGGAGTTATAAAACATATATGGCCTCACTGCCAGGTGGAGGTGTTTGGGTCTTTCAGGACAGGGTTGTATCTTCCAACTAGTGATGTTGATGTTGTGATTTTGAAATCATGCTTGCCAAATCCGCAGATTGGCTTAAATGCAATTTCTAAAGCATTGTCACAAAGAGGCATGGCAAAAAAGATTCAGGTCATTGGCAAGGCTCGTGTTCCAATTATTAAATTTGTTGAAAAGAGGAGTGGTGTTGCATTTGATATAAGTTTTGACATAGACAATGGACCCAAAGCAGCTGAGTATATCCAGGAAGCAGTGGTTAAGTGGCCACCACTAAGGCCCCTGTGTTTGATTTTGAAAGTATTTTTGCAGCAAAGAGAACTAAATGAGGTATATTCTGGTGGGATTGGTTCTTATGCCCTCCTTGCCATGCTGATGGCAATGTTGCGGAATCATCGCCTGAGCCAAGTATCTGCAGAGCAAAACCTGGGAGTTCTTTTGGTGCATTTTTTTGATTTTTATGGACGCAAATTGAACACCTCAGATGTTGGCGTTTCTTGTAATGGGACTGGCACCTTTTTCGTGAAGAGTAGTAAAGGCTTATATATAACAGCCATTTTTTTGCCATTTCCTTTGAGAACTTCTAAAATAAAGCAATTATTTTCTCAAAATCAAGCCAAGCAAAAATTTAAAAATATTAGGTCAGCTTTTTCATTGGCTTTCAAAAATTTGACAGATCCCAAGATCATTACGGGCTTGGGAGCAAACAGGAGCATTCTGGGCGCTATAATTAGACCAGATCCTGTCTTGCTGGAGCGTAAAGGCGGGTTGAATGGCGATGTGACTTTTGATAAGTTGCTTCCTGGTGCCGGTGAGCCAGTACAACACCATTATGGAGACAAGGATATGTTATGCAATTGGCAGTTAGATTATGAAGAAGAACCACTACTGCGTGGAGTTGACACTAGTGCAGAGCCTAGCACGCATTCTTCAACAAAGAAGAGGAAATCTTCTTCAAAGAAATCCAGTAAGAAGCTAAAGGAAAATGGGATGGTGGGGAACCAGGAGAATGACTCTAGAAAAGAAAAAAAGAAGAAAAAGAGGAGAAAATCTCACCTAGCTGACAGCGGTCATTAG 1494 0.4511 MEEEQELKIPETIVYDTISPLALSAADSPLSDHPESYTVFRNEISLETPQRASPTTATVDFFSLDVAADTSAGDPFPEPLAAPDPETPAPEPKLEKIVDFCEFLSPTAEEKASRDLAIESVFGVIKHIWPHCQVEVFGSFRTGLYLPTSDVDVVILKSCLPNPQIGLNAISKALSQRGMAKKIQVIGKARVPIIKFVEKRSGVAFDISFDIDNGPKAAEYIQEAVVKWPPLRPLCLILKVFLQQRELNEVYSGGIGSYALLAMLMAMLRNHRLSQVSAEQNLGVLLVHFFDFYGRKLNTSDVGVSCNGTGTFFVKSSKGLYITAIFLPFPLRTSKIKQLFSQNQAKQKFKNIRSAFSLAFKNLTDPKIITGLGANRSILGAIIRPDPVLLERKGGLNGDVTFDKLLPGAGEPVQHHYGDKDMLCNWQLDYEEEPLLRGVDTSAEPSTHSSTKKRKSSSKKSSKKLKENGMVGNQENDSRKEKKKKKRRKSHLADSGH 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0615 497 SUPERFAMILY PAP/OAS1 substrate-binding domain 229 368 - -
Aed1g0615 497 Gene3D - 218 277 - -
Aed1g0615 497 PANTHER POLY(A) RNA POLYMERASE 95 490 IPR045862 GO:0004652|GO:0031499|GO:0043631
Aed1g0615 497 MobiDBLite consensus disorder prediction 481 497 - -
Aed1g0615 497 Pfam Nucleotidyltransferase domain 125 222 IPR002934 GO:0016779
Aed1g0615 497 PANTHER INACTIVE NON-CANONICAL POLY(A) RNA POLYMERASE PROTEIN TRF4-2-RELATED 95 490 - -
Aed1g0615 497 Gene3D Beta Polymerase, domain 2 106 214 IPR043519 -
Aed1g0615 497 Pfam Cid1 family poly A polymerase 281 319 IPR002058 -
Aed1g0615 497 MobiDBLite consensus disorder prediction 438 497 - -
Aed1g0615 497 CDD NT_PAP_TUTase 114 223 - -
Aed1g0615 497 SUPERFAMILY Nucleotidyltransferase 94 241 IPR043519 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0615 K03514 - gmx:100811320 731.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0615 1 7488765 7493964 Aed1g0615 1 7488765 7493964 ECH