Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0611 ATGGGGGGTCTTCGATTCGTTCCAAGATTTGATCTTTTTGAAGATTCTTCATCTGGGTTTTCGCTTTTCAGCCATGATCGTGTTGTTTTGTTTTGTGTTGTGATGTTTTCGGTTGACACGATTTTTCCCTTTTCTGCTTTAAAGTCACTGCTTTTTGCTGTCGTTGAGATAAGCTTTTCGTGTCTGTTGCTGCATGTCATTTTTCATGATGTGATTGACATTGATGATGACTCTGAAGATGTAGTGATAATTGGCGAAAAATTTAATAGTAGTAACAAAGGGAAGACAATTGACGCTGTTCACGATGATCATCAAGTGAAAGATTATACTTATTCTCTGCCTGGTGTGGAAAATTTTGGATCAGTTAGCGAGATTGCATCTTCTAACAATTTACCTACAGTGTCAAATAATTTAATCAACATTGATGGTCATGGTTCTGATCTATCATATGACGACGATGACTACATTGATATTTTGTCAGAAGATTATATGGATGTAGATGAGTATGCTTTATTACAGAAACACTTTGATAATGTGGACATACCTCCTGGAATTGAAGCACCTTTTACTTGGTTGCCACCAGACTATGTCGTAGGTTTGAAGAAGACTGGAAACAGTACATTGTATCCTTGGCATCCTATGACACCCGCTTCTCAGCCTTCTTTGTCATTAGAGCCAACTAACTCTAAAATTCAAGCATCTTTAGGGGGTGGTATTAACATTCCAATCAAAATGGAAAATGCTAATCACTCTTCTGGAGCAGAGTTGTCTTCTCCTCAATATTTTTCCGAACCTGCCCCTTCTAAGAAGAAATCAGCTACTTCAAAACTCAGAGGGCGCACTTCGAATGCTTCATTAGGAGTAGAGTCATCTAAGTCTCACTGGTATCCGGGGCCTTTCAAATGGAACATGAAGCCTGCTTCAATATACCATGGTTTTAGTGACAATTCAGAGGCCGTGAAGCTGCCACATGCAGGTGAGCCTCCATATTGGGGGCACTTTAAAAGTGCTAAGAAGGCAGCTGGCAGTAGCATTTCTTCCCATTCAACTTTCATTGGACATCATGGATCATTGCATCCTCCAGGAATGGAATCAGGAAAACCTTGGTGGAAGAGTTCTCATAATGCTAAACCATTTACTACTCATCTTAATAATATTCCTAATCATATTTATTATCCATTTGATCCTCTTATTGCCCATCCTGAGCATGTGTTTGATAACAACTGGGTTCACGATTCCGCCAGCGATGGATTTAATGGAAAAACTGTGGATGGCCCTATTGTGACAATCTCGGATGAAGCCAAAGATGAAATTCTGAGAAAATTTCAAAGTTTTAAACAATTTGACACAGTTGAAGATCCTTCAGACCATCACTTTATTCGCAGTAGTTCTTCAAGGCAGCAGCCTCCCAAGAATTGGGCTAAAAAAATCCAGGAAGAGTGGAAGATTTTGGAAAATGATTTGCCAGATTCAATATTTATCAGAGTTTATGAGTCAAGGATGGATCTTTTAAGGGCTGTGATTATTGGAGCAGAAGGGACTCCTTATCATGATGGGCTTTTCTTTTTTGATGTTTTATTTCCCAGTGACTATCCTAATGTACCGCCGTATTTTGAGGACTTTGTTAATGGGCATTTCTTCAACCGAGCTAGCGATATCCTGGTGGCATGTAAGGCATACATGGAAGGTGCTCAAGTCGGGTGTTTGGTCAAAGGAGGTGTTCAGGATGTCGACGAGGGAGACACAAGCTGCTCACAGCGATTCAAGAATTCTTTATCGGGATATGTGAACATGCTTGTCAAAGAGTTTGCCAAAGTTGGAGCAAAGGACATTGGGAAATTCTTGCCTCCAGCAGCAACAGCAACACCACCATCAGTAGTGAACAGAACAAGCCATGAGGGAGGTGTAAGTATTGCCTGA 1920 0.4047 MGGLRFVPRFDLFEDSSSGFSLFSHDRVVLFCVVMFSVDTIFPFSALKSLLFAVVEISFSCLLLHVIFHDVIDIDDDSEDVVIIGEKFNSSNKGKTIDAVHDDHQVKDYTYSLPGVENFGSVSEIASSNNLPTVSNNLINIDGHGSDLSYDDDDYIDILSEDYMDVDEYALLQKHFDNVDIPPGIEAPFTWLPPDYVVGLKKTGNSTLYPWHPMTPASQPSLSLEPTNSKIQASLGGGINIPIKMENANHSSGAELSSPQYFSEPAPSKKKSATSKLRGRTSNASLGVESSKSHWYPGPFKWNMKPASIYHGFSDNSEAVKLPHAGEPPYWGHFKSAKKAAGSSISSHSTFIGHHGSLHPPGMESGKPWWKSSHNAKPFTTHLNNIPNHIYYPFDPLIAHPEHVFDNNWVHDSASDGFNGKTVDGPIVTISDEAKDEILRKFQSFKQFDTVEDPSDHHFIRSSSSRQQPPKNWAKKIQEEWKILENDLPDSIFIRVYESRMDLLRAVIIGAEGTPYHDGLFFFDVLFPSDYPNVPPYFEDFVNGHFFNRASDILVACKAYMEGAQVGCLVKGGVQDVDEGDTSCSQRFKNSLSGYVNMLVKEFAKVGAKDIGKFLPPAATATPPSVVNRTSHEGGVSIA 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0611 639 MobiDBLite consensus disorder prediction 250 284 - -
Aed1g0611 639 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 537 619 - -
Aed1g0611 639 MobiDBLite consensus disorder prediction 250 270 - -
Aed1g0611 639 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 39-RELATED 537 619 - -
Aed1g0611 639 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 39-RELATED 65 536 - -
Aed1g0611 639 Gene3D Ubiquitin Conjugating Enzyme 431 538 IPR016135 -
Aed1g0611 639 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 65 536 - -
Aed1g0611 639 Pfam Ubiquitin-conjugating enzyme 477 538 IPR000608 -
Aed1g0611 639 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 472 536 IPR000608 -
Aed1g0611 639 SUPERFAMILY UBC-like 457 537 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0611 Aed-Chr1 7469459 7474786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0611 535 618 Miscellaneous Gene Families AT2G33770 34.524 1.37e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0611 K10581 - gmx:100810772 766.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0611 1 7469459 7474786 Aed1g0611 1 7469459 7474786 ECH
Aed1g0611 1 7469459 7474786 Aed5g1155 5 9931549 9934016 PCT