Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0602 ATGGCGGTTGAGGTTGCGGGATTTGAGATGGTTCAGGGACCAGTGGAGAATGGTACTATTGAAGGAGGAAAACCTGTTTTGAATGAGAAGGAGAATGGCAAGCTGGAACAAGATTCGGGAGCTGCTGAGGCCATCAAATTTGGGACACATGGAGATGAATCTGCGAAGGGAGAGGGCAATGATGTTTCAGATGCGAATGTCCCAAAAGACGCTGCTGAAGATTGGCCTGCACCTAAGCAGATTCATTCTTTTTATTTTGTCAGGTGGCGGCCTTATGATGATCCAATCATCAAGTCTAAAATTGATGTGTTTGACAAAGAGATTAGCAAGAAAAATCAAGCCCGGTTTCAGATCACCGAAGCGCTGAAGGCAAAGCGGTCAGAGCGTGCCGAGTTGATTTCTCAGATCAAGTCTCTAAGAGGTGACAGTAGGCAATTTCAGAGTATCGTGGGTGAGAAACTGAAAGAGATTGAACCTCTGCAGCAAGCACTGGGCAAGCTGCGCACTGCAAATAATGCAGGCCGGGGTGGTTTGTGTTCATCTGAGGACGAACTTAACAGTGTTATATATAGTTTACAGTACCGCATACAGCATGAGAGCATTCCATTGACTGAGGAAAAACAAATCCTCCGAGAAATCAAACAGCTTGAGGGGACAAGGGAGAAAGTTATTGCTAATGCTGCAATGAGGGCCAAGTTACAGGAATCTATGGGGCAGAAAGAAGCCATTCAAGATCAGGTTAAGCTTATAGGTGGGGATTTGGATGGGGTGAAGAAAGAGAGAGAAACGATTCGGTCCAAAATCAAGCAAGTTGATGATGCACTGAAAATCATAGACAAGGATATTCAGTCTCTACAGGAGGAACTAGCAGCTGTTTCTCAGAAGAGGGACAAATCTTTTGAGGGCATGCAGCAGCTTAGAAAACAGCGCGAGGATGGGAACTCCTATTTCTACCAAAGTCGTGCTGTTCTGAACAAAGCACGGGATCTGGCTGCAAAGAAAGATATTAATGCTCTTGATGAAGTTTCTCAGACAGAGGTTGAGAAATTTATGGCACTCTGGAACAGTGACAAAGCATTTAGGAGTGATTATGAAAAAAGAATTTTGGCCTCATTGGATATGCGGCAGTTGAGTAGGGACGGACGGATGAGGAACCCAGATGAAAAGCCAATCCTGGAAGAACCAAAACCTGTTGAAGCTGAAGCATTACCAAAAGACCGCGAGAAGAAAGCAAAGAAGAAAGGTTCAGGCGCAGCAGCTGTTGCCAACCCTGAGGACGAACCAATAGATGAAATCGTCGAGGCTACAGAGCCGGAAATGGCCAACGATGATGTCCAAGCCCCAGCTCCAGTGAAGGAAAAGGTCAAAAAGGAGAGTGGCATCAGGTCCAGGGGCCGACCAAGAGGTCCAGACTCGGTTCCAAAAGCTATCTTTAAGCGTAAGAAGTCTAACAATTACCTGATATGGGCTGCAGCTGCTGCTTTGCTAGTCCTCCTGTTGGCTGTGCTTGGATACATCTATCTTTTCTGA 1530 0.4595 MAVEVAGFEMVQGPVENGTIEGGKPVLNEKENGKLEQDSGAAEAIKFGTHGDESAKGEGNDVSDANVPKDAAEDWPAPKQIHSFYFVRWRPYDDPIIKSKIDVFDKEISKKNQARFQITEALKAKRSERAELISQIKSLRGDSRQFQSIVGEKLKEIEPLQQALGKLRTANNAGRGGLCSSEDELNSVIYSLQYRIQHESIPLTEEKQILREIKQLEGTREKVIANAAMRAKLQESMGQKEAIQDQVKLIGGDLDGVKKERETIRSKIKQVDDALKIIDKDIQSLQEELAAVSQKRDKSFEGMQQLRKQREDGNSYFYQSRAVLNKARDLAAKKDINALDEVSQTEVEKFMALWNSDKAFRSDYEKRILASLDMRQLSRDGRMRNPDEKPILEEPKPVEAEALPKDREKKAKKKGSGAAAVANPEDEPIDEIVEATEPEMANDDVQAPAPVKEKVKKESGIRSRGRPRGPDSVPKAIFKRKKSNNYLIWAAAAALLVLLLAVLGYIYLF 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0602 509 SUPERFAMILY Tropomyosin 243 311 - -
Aed1g0602 509 PANTHER PROTON PUMP-INTERACTOR 1 10 436 IPR029669 GO:0005783|GO:0005886|GO:0010155
Aed1g0602 509 Coils Coil 122 142 - -
Aed1g0602 509 MobiDBLite consensus disorder prediction 379 415 - -
Aed1g0602 509 Coils Coil 268 295 - -
Aed1g0602 509 MobiDBLite consensus disorder prediction 15 74 - -
Aed1g0602 509 MobiDBLite consensus disorder prediction 379 476 - -
Aed1g0602 509 PANTHER RNA-BINDING PROTEIN YLMH-RELATED 10 436 - -
Aed1g0602 509 MobiDBLite consensus disorder prediction 449 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0602 Aed-Chr1 7406693 7411785 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0602 - - gmx:100819875 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0602 1 7406693 7411785 Aed1g0602 1 7406693 7411785 ECH