Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0590 ATGCTGGGAATTTACCTACAATCCTCATGCATCATATCACTTATTTTCTCCATCGTTATATCCATTATTTGGTTCTATACAGAACCAATCCTAGTGTTGCTTCATCAATCTGAAGATATTGCAAAAACAGCTGCTCTTTATATGAAGTTTCTTATCCCGGGAGTGTTTGCATATAGCTTCTTGCAAAACATCTTGAGGTTTCTTCAGACACAATCTGTAGTAATTCCATTGGTTGTGCTCTCGGCTCTTCCAATGCTGCTTCATATTGGTATTGCATATGGCTTGGTTCAGTGTCCAGGTCTTAGTTTCACAGGTGCACCAATTGCAGCTTCTGTTTCACTATGGATATCAATGGTATTATTGAGCTTATATGTAATGTATGCTAAGAAGTTCAAGCAGACATGGCAAGGATTTTCAGTGCATTCATTTGGTTACGTATTTACAAACATGAAACTAGCTCTGCCCTCTGCTGCAATGGTATGTTTCGAGTATTGGGCTTTTGAAGTTTTGGTTTTCTTAGCTGGACTATTGCCTGACTCACAAATAGAAACTTCGTTGATTGCAATATGTGCAAACACAGAATTCATTGCCTACATGATCACTTATGGTCTCAGTGCGGCTGCAAGCACAAGGGTGTCCAATGAATTGGGAGCAGGCAACCCGGAACGAGCTAAGAACGCAATGAATGTCACACTCAAGCTCTCTCTACTCCTTGGTTTCTGTTTTGTTTTGGCACTTGGATTTGGTCACAACATACGGATTCAGCTTTTCAGTGATAGTGATAAAATTAAAGAGGAGTTTGCTTCAGTGACACCATTGCTTGCAATTTCCATATTACTAGATGCCATCCAGGGCGTCTTGTCAGGGGTGGCCAGAGGATGTGGCTGGCAGCACTTGGCTGCTTACATTAACCTTGCTACATTTTATCTTATTGGTTTACCAATATCATGTTTCCTAGCATTTAAGACCAGTTTACAGTTTAAGGGTTTATGGATTGGTGTGATTTGTGGGCTGCTCTGTCAAACTGGGACTCTCTTCCTTTTCACAAGGCGTGCTAATTGGTCTAAGTTAAATCTTTCCTCGGGGGACAAGGACAAAGATAAAGATCGGTCTCTTGCGGTTTAA 1125 0.4098 MLGIYLQSSCIISLIFSIVISIIWFYTEPILVLLHQSEDIAKTAALYMKFLIPGVFAYSFLQNILRFLQTQSVVIPLVVLSALPMLLHIGIAYGLVQCPGLSFTGAPIAASVSLWISMVLLSLYVMYAKKFKQTWQGFSVHSFGYVFTNMKLALPSAAMVCFEYWAFEVLVFLAGLLPDSQIETSLIAICANTEFIAYMITYGLSAAASTRVSNELGAGNPERAKNAMNVTLKLSLLLGFCFVLALGFGHNIRIQLFSDSDKIKEEFASVTPLLAISILLDAIQGVLSGVARGCGWQHLAAYINLATFYLIGLPISCFLAFKTSLQFKGLWIGVICGLLCQTGTLFLFTRRANWSKLNLSSGDKDKDKDRSLAV 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0590 374 Pfam MatE 2 93 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aed1g0590 374 Pfam MatE 155 316 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aed1g0590 374 PANTHER MULTIDRUG RESISTANCE PROTEIN 1 362 - -
Aed1g0590 374 PANTHER PROTEIN DETOXIFICATION 1 362 - -
Aed1g0590 374 CDD MATE_eukaryotic 1 356 IPR045069 GO:0042910|GO:1990961
Aed1g0590 374 TIGRFAM matE: MATE efflux family protein 2 331 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0590 Aed-Chr1 7332295 7334012 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0590 K03327 - gmx:100816310 626.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0590 1 7332295 7334012 Aed1g0590 1 7332295 7334012 ECH