Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0588 ATGGAGATAGAGCATATGACGGCAAGCACAAGTTCTGATGCAACAACAGGAACACCACCAGCATTAAGGGCATATGATAATGGAAGATCCCAAGTTGGAGGGTGGTGGAACAAAGTATTGGACAAGGAAGAGGCCAAACGCCAACTCTTATATTCGTTACCAATGATTTTTACTAACATGTTCTATTACTTGATCACTTTGATTTCTGTCATGCTTGTTGGCCACCTTGGAGAGCTTGAACTTGCTGGTGCTACTCTTGCAAACTCTTGGTTCACTGTCACTGGCGTGGCACTTATGGTTGGTTTGAGTGGGGCACTGGAAACACTTTGCGGGCAAGGATTTGGTGCAAAGGAATACAAAATGTTGGGAATTTACCTACAAGCCTCATGCATCATATCTCTTATTTTCTCCATCGTTATATCCATTATTTGGTTCTATACAGAACCAATCCTAGTGTTCCTTCATCAGTCTCATGACATTGCAAGAACAGCTGCTATTTATATGAAGTTTCTTATCCCTGGAGTGTTTGCTTATAGCTTCTTGCAAAACATCTTGAGGTTTCTCCAGACACAGTCTGTGGTAGGGCCATTGGTTGTGCTCTCAGTTCTTCCAATGTTGGTTCATATTGGTATTGCATATGCCTTGGTTCACTGGTCAGGTCTTAGTTTTAGAGGTGCACCAGTTGCAGCTTCAATTTCACTATGGATATCAATGGTGTTATTGACCTTGTATGTAATGAATGCTAAGAAGTTCAAGCAGACATGGCAAGGATTTTCAATGCATTCATTGCATTACATATATACAAACATGAAACTAGCTCTGCCCTCTGCTGCAATGTATTGGGCTTTTGAAGTTTTGGTTTTCTTAGCTGGACTATTGCCCGACTCACAAATATCAACTTCGTTGATTGCAATATGTGCAAACACAGAATCCATTGCCTACATGATCACTTATGGTCTCAGTGCGGCTGCAAGCACAAGGGTGTCCAATGAATTGGGAGCAGGCAACCCTGAACGAGCAAAACATGCAATGAATGTTACACTCAAGCTCTCTTTCCTCCTTGGTTTCTGTGTTGTTTTAGCACTTGGATTTGGTCACAATATATGGATTCAGCTTTTCAGTGACAGTGCTAAAATCAAAAAGGAGTTTGCTTCAGTGACACCATTGCTTGCCATTTCCATATTACTAGATGCCATCCAAGGTGTTTTGTCAGGGGTGGTCAGAGGACATGGCTGGCAGCACTTGGCTGCTTGCATTAACCTTGCTACATTTTATCTTATTGGTTTACCAATATCATGTCTCCTAGCATTTAAGACCAGTTTGAAGTATAAGTTTGAGAAGAATAATCTTGATTTTGAGAATTCACTAGTTTATATTAATATAATTGTGTTGAATTTGGTTTATGATAAAGGGTTTATGGATTGGTCTGATTTGTGGGATGGTTTGTCAAAGTGGAACTCTCTTCGTATTCACAAGGCGTGTCAAATGGTCTAA 1494 0.4056 MEIEHMTASTSSDATTGTPPALRAYDNGRSQVGGWWNKVLDKEEAKRQLLYSLPMIFTNMFYYLITLISVMLVGHLGELELAGATLANSWFTVTGVALMVGLSGALETLCGQGFGAKEYKMLGIYLQASCIISLIFSIVISIIWFYTEPILVFLHQSHDIARTAAIYMKFLIPGVFAYSFLQNILRFLQTQSVVGPLVVLSVLPMLVHIGIAYALVHWSGLSFRGAPVAASISLWISMVLLTLYVMNAKKFKQTWQGFSMHSLHYIYTNMKLALPSAAMYWAFEVLVFLAGLLPDSQISTSLIAICANTESIAYMITYGLSAAASTRVSNELGAGNPERAKHAMNVTLKLSFLLGFCVVLALGFGHNIWIQLFSDSAKIKKEFASVTPLLAISILLDAIQGVLSGVVRGHGWQHLAACINLATFYLIGLPISCLLAFKTSLKYKFEKNNLDFENSLVYINIIVLNLVYDKGFMDWSDLWDGLSKWNSLRIHKACQMV 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0588 497 CDD MATE_eukaryotic 44 442 IPR045069 GO:0042910|GO:1990961
Aed1g0588 497 PANTHER PROTEIN DETOXIFICATION 24 439 - -
Aed1g0588 497 Pfam MatE 54 213 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aed1g0588 497 Pfam MatE 273 432 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aed1g0588 497 PANTHER MULTIDRUG RESISTANCE PROTEIN 24 439 - -
Aed1g0588 497 TIGRFAM matE: MATE efflux family protein 54 441 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0588 Aed-Chr1 7326790 7329210 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0588 K03327 - gmx:100816310 680.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0588 1 7326790 7329210 Aed1g0588 1 7326790 7329210 ECH