Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0569 ATGGCGTCAACTTCACATGGCGGCGGCGGTGGCAGCGGCAGCGCCGCCGCACGGTTGAAGAACGCAGCTTCCACTTTCTGCACCGACTCTCAGCCTATCATTTCCGATATTCGAAAAACCGCGATTTTGATGAAGGAAATCGCAGTTCAATTGGAGAAAGACAACCTCCCTGACAAGGCGAAGGAGCTTGAAGATGCGGTTATTGAGTTAGTGGGGCTATCTGAACTCAGTGTGCAATATTCATCAACGGTTCAAGCTTATGCCAACACTTACCAGCCTAGGGAAGAGTACACTAATTTTAACAAGTTGTTTGAGGATGAACTTTCCAGGTTTAAGGCCAACCAAACTTCAGATCTTCCTAAACATCCTTTAGTACGGCAGTTTAAGGAAGCTGTGTGGAATGTTCATCATGCGGGACAGCCAATGCCAGGTGAAGAGCAGGAGGATATTGTAATGACCAGTACCCAGTCTAATATTTTGAATATTACCTGTCCATTGAGTGGAAAACCTATTTCTGAGCTTGCGGAACCAGTTCGCAGCATGGAGTGTAGGCACATTTATGAAAAGAAAGTAATAATGCAATATTTGAAGTCAAAGCAACACCGTGGTCAATGCCCAATCTCAGGTTGCCCAAAGATATTGCATGCAGATAAGCTGGTGCAAGATCCGTTGTTAATGATTGAGATTGAGGAAATGCAAAAAAAGAATAGAGAAACTGACGTAGAAGATTATACCATGCTTAATGAAGATTAG 753 0.4396 MASTSHGGGGGSGSAAARLKNAASTFCTDSQPIISDIRKTAILMKEIAVQLEKDNLPDKAKELEDAVIELVGLSELSVQYSSTVQAYANTYQPREEYTNFNKLFEDELSRFKANQTSDLPKHPLVRQFKEAVWNVHHAGQPMPGEEQEDIVMTSTQSNILNITCPLSGKPISELAEPVRSMECRHIYEKKVIMQYLKSKQHRGQCPISGCPKILHADKLVQDPLLMIEIEEMQKKNRETDVEDYTMLNED 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0569 250 CDD SPL-RING_NSE2 162 231 IPR004181 GO:0008270
Aed1g0569 250 ProSiteProfiles Zinc finger SP-RING-type profile. 146 234 IPR004181 GO:0008270
Aed1g0569 250 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 156 245 IPR013083 -
Aed1g0569 250 Pfam Zinc-finger of the MIZ type in Nse subunit 149 210 IPR004181 GO:0008270
Aed1g0569 250 PANTHER UNCHARACTERIZED 15 239 IPR026846 GO:0000724|GO:0019789|GO:0030915
Aed1g0569 250 SUPERFAMILY RING/U-box 163 211 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0569 K22756 - gmx:100804379 432.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0569 1 7202172 7206834 Aed1g0569 1 7202172 7206834 ECH