Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0561 ATGGAAGCTTATATGTGGGACACAGAAGACGGGGACAACAATGGCGGCGGTTCCACTGCAAAGAAATTGAAGAAGAAGCAGCAGCGTAAAAGGAAGGAGTACATGGTGGACGAGGATGGGCAGGTGGGGGCGAGACAGAAGCTGGCAAAAAGAATCTTGCTGTCTTTGACTAGGCCTTCATATGTTTTGGGATTGGGTCCCAAACCTCTGAGGGTGGAACACCGTAGAAGGTTGCGCTACCTGCTACGGAGGCTTGTCAACCAGCATCTTTGGGTTGCAGCCAGTAGTGTTCTCAGTGCCTACTTGAAGGGAACACTTGATGACACCTCTCCCGACAGGAACCGTTTTAAGTTTTGGGTTTTACTGGAGCTTCTTAAGCATCTGGAAAACTGTTCTATTAATCCAACACGAATCAAAAACCTCTATGATATTTGGTCGAAGAAAATTGGACCAATGAAGGTTTGGCCAGTTGAGAGCAGACATGCAGTCCATTTGGAGTTCATGTTTTTCTGTCTTTTGCGAGGCAATGTTGAGGATGCTTACCAGCTTGCACTATGCCTTGACCAAGAAAAAAGTGATATTGGTCCTATGTCAAAGATGATGCTGGGTTTGACATTCTATGAGTTGTGGTATTCTTCTATACCCAGAGAATTTCAGTGGAGAAATTCAGACCAGTTTGACTTGCAAGAGAACTCAGATATGGAGGGATCCTCACTCAGCAACGAAATTGTACAGTCAGATAGGTATAATTCAGTTGAATCCCACATGGCTGACTCCCAATCTCAATGTGATTCAGAGGCCTCTGTCATGAATAATAAGCAGATATCTAGGGATGTTGTCTTTAATGCAGACATGGAGGTTGATGCTAATAAAAGAGAAAGACCGCATCAGAACTTTCAGCCAGAAGGGTTTTACTTAAATTCTGAAGAGCAGAAAGGATTTGGAGATCCTTTTTCTAACAATGGAGGTCTTACACAGGATATCTTGTATGGTCTTGCTCTAGACTCAGAACCTTCCGCTTCAGCAGCATTACTTCCATTGATACAGCTGTTGCTGATTGGAGGTCAAGTTGACAAGGCTCTACATATGCTTGAGAAGCAATGCTGTAACTCAGCCTCTGTAATCCCAAAAAGAGTAAGGGCTGCTCTCTTGGAGCACTTTGATCGAAACAACTCTCTCCTGCTTATTAGTTGTTTCGAGGATATATTGAAGAAGGATCCAACATGTAGTGATGCCTTAGCAAAACTTATCAAGATGTGTCAAAATGGAGACTATAGTCTTGAATCTCTGCTGGAAATGATTGCTCTACATTTAGATGCTACATATGCAGAGTACGATACATGGAGGGTGTTCTCTTCATGTTTCTTGAGACTGTCTTCCTACGAAGTAGACTGCATGTCTTCAATCCCTTTTCAAAATGAAGATAGACAAAAACAACGTTTTTCCCTTAACAAAACTCCTACAATATTTACGGATGGTATATCAGGAGAATCTTGGAGACTTCGCTGGGATTTGCGGTTACTTACATACAAAGCGGCATGTGCATCGTATATGTATGGATGGGAATTCAGCTATGCCGCGAAGGCTTATTCTCATTTAGAAAAAGAAAATGATGAGTTGCTGTTATTCTTGGATGAGCACAGGGGAAGTTCATTTGTAATTTATAAAAAAACTCAAAAGAAATTTACACACCTAACATAA 1701 0.4192 MEAYMWDTEDGDNNGGGSTAKKLKKKQQRKRKEYMVDEDGQVGARQKLAKRILLSLTRPSYVLGLGPKPLRVEHRRRLRYLLRRLVNQHLWVAASSVLSAYLKGTLDDTSPDRNRFKFWVLLELLKHLENCSINPTRIKNLYDIWSKKIGPMKVWPVESRHAVHLEFMFFCLLRGNVEDAYQLALCLDQEKSDIGPMSKMMLGLTFYELWYSSIPREFQWRNSDQFDLQENSDMEGSSLSNEIVQSDRYNSVESHMADSQSQCDSEASVMNNKQISRDVVFNADMEVDANKRERPHQNFQPEGFYLNSEEQKGFGDPFSNNGGLTQDILYGLALDSEPSASAALLPLIQLLLIGGQVDKALHMLEKQCCNSASVIPKRVRAALLEHFDRNNSLLLISCFEDILKKDPTCSDALAKLIKMCQNGDYSLESLLEMIALHLDATYAEYDTWRVFSSCFLRLSSYEVDCMSSIPFQNEDRQKQRFSLNKTPTIFTDGISGESWRLRWDLRLLTYKAACASYMYGWEFSYAAKAYSHLEKENDELLLFLDEHRGSSFVIYKKTQKKFTHLT 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0561 566 Pfam TAF RNA Polymerase I subunit A 85 531 IPR039495 GO:0000120|GO:0006360
Aed1g0561 566 MobiDBLite consensus disorder prediction 1 30 - -
Aed1g0561 566 PANTHER TAF RNA POLYMERASE I SUBUNIT A 18 313 - -
Aed1g0561 566 PANTHER TAF RNA POLYMERASE I SUBUNIT A 332 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0561 Aed-Chr1 7133442 7139812 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0561 - - gmx:100819662 892.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0561 1 7133442 7139812 Aed1g0561 1 7133442 7139812 ECH