Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0544 ATGGCGTTGCGTCATTCACGATTCTTCCCTCACAGTCACACACTTCCTCTAACACTCACTCTCATTCCCAAACACAGTAGTAACCGTTTTTCCTTCTTCACTCCCTCACTCTCTTCGACCAAACTCATGGCCACTGCTCACAAGGTCCTCGTTCCGATCGCCGACGGCACCGAGCCCATGGAGGCCGTCATCACCATCGACGTCCTCCGCCGCTCCGGCGCCGACGTCACCGTCGCTTCCGCTTCCGCTTCCTCCAACCTCGCCGTCCAAGCTCTCCACGGCATCAAGGTCCTCGCCGATGCTTCCATCGGAGACGTCGCCGGCACCGCCTTTGACCTCGTCGCTCTCCCTGGAGGGTTACAGGGTGTTGAGAATCTGAGGGACTGTAAAGTTCTGGAAGGGTTGGTGAAGAAGCATGTTGAGGATGGACGGCTTTATGCCGCCGTGTGTGCTGCTCCTGCAGTAGTGCTTGGGCCTTGGGGTTTGCTGAATGGGAAAAAGGCGACTTGTTATCCTGCATTGATGGATAAATTGGCCTCTTACGCAGCCTCTACTTCTGAGTCTAGGGTGCAGGTGGATGGCAGAGTTGTGACCAGTCGTGCTCCAGGAACTACCATGGAGTTTGCCGTTGCTCTGATTGAGCAGTTAATTGGAAAAGAGAAAGCGGATGAAGTTGCAGGTCCATTGGTCATGCAATCCAATCATGATGATGAACATACTTTTAAGGAGTTTAACCCAGTGCAGTGGACATCTAACAATCCACCCAAGATTCTTGTACCAATTGCTAATGGTTCAGAGGAAATGGAAGCTGTGATTATCATTGATATTCTGCGTAGAGCAAAAGCAAAGGTTGTGGTTGCTTCTGTTGAGGATAAACTAGAGATTGTGGCAACACGCAAAGTTAAACTGGAGGCAGACATGCTCCTTGATGAAGCAGCCAAACTTTCATATGACCTTATTGTGTTACCTGGAGGACTTGCTGGTGCCCAAACTTTTGCAAACTCAGAAACCTTGGTGAGTTTGCTGAAAAAGCAAAGAGAATCAAACAAATATTATGGAGCAATTTGTGCATCCCCAGCTTTCGTCTTGGAGCCCCATGGCTTGCTAAAGGGTAAAAAGGCCACTGCCTTTCCTCAAATGTGCAACAAGTTATCAGATCAGAGTGAAATAGAAAACAGGGTGGTAGTTGATGGCAATCTTATTACCAGCAGAGGCCCAGGAACCTCCATTGAGTTTGCATTAGCTATTGTGGAGAAGCTGTTTGGACGCAAGTTAGCACTAGAACTTGCGAAGGCAGTAGTGTACGCACGCCCTTAG 1317 0.4943 MALRHSRFFPHSHTLPLTLTLIPKHSSNRFSFFTPSLSSTKLMATAHKVLVPIADGTEPMEAVITIDVLRRSGADVTVASASASSNLAVQALHGIKVLADASIGDVAGTAFDLVALPGGLQGVENLRDCKVLEGLVKKHVEDGRLYAAVCAAPAVVLGPWGLLNGKKATCYPALMDKLASYAASTSESRVQVDGRVVTSRAPGTTMEFAVALIEQLIGKEKADEVAGPLVMQSNHDDEHTFKEFNPVQWTSNNPPKILVPIANGSEEMEAVIIIDILRRAKAKVVVASVEDKLEIVATRKVKLEADMLLDEAAKLSYDLIVLPGGLAGAQTFANSETLVSLLKKQRESNKYYGAICASPAFVLEPHGLLKGKKATAFPQMCNKLSDQSEIENRVVVDGNLITSRGPGTSIEFALAIVEKLFGRKLALELAKAVVYARP 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0544 438 TIGRFAM not_thiJ: DJ-1 family protein 48 227 IPR006287 -
Aed1g0544 438 TIGRFAM not_thiJ: DJ-1 family protein 256 431 IPR006287 -
Aed1g0544 438 PANTHER PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED 44 433 - -
Aed1g0544 438 PANTHER BNAA06G01020D PROTEIN 44 433 - -
Aed1g0544 438 Pfam DJ-1/PfpI family 256 418 IPR002818 -
Aed1g0544 438 Pfam DJ-1/PfpI family 47 215 IPR002818 -
Aed1g0544 438 Gene3D - 249 437 IPR029062 -
Aed1g0544 438 Gene3D - 41 244 IPR029062 -
Aed1g0544 438 SUPERFAMILY Class I glutamine amidotransferase-like 254 436 IPR029062 -
Aed1g0544 438 CDD GATase1_DJ-1 49 216 - -
Aed1g0544 438 SUPERFAMILY Class I glutamine amidotransferase-like 47 237 IPR029062 -
Aed1g0544 438 CDD GATase1_DJ-1 257 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0544 Aed-Chr1 7001878 7005868 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0544 K03152 - gmx:100803116 751.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0544 1 7001878 7005868 Aed1g0544 1 7001878 7005868 ECH