Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0487 ATGGTTGGATCTGTCCTTATTCCTCCGAAATTTAAGCTTTTTGGTATGGAAAAGTTAGATCGATCCACCGATCTTCTAGCCATACTAGGAAAAGGTGATTCTGGTAATCTTAAGGAATTAGTTCTTATTAAAGGTGTGAAACTAACCTCTACTGCCCCTGAGTTATATTTTACTATGCTGTCTAGCATGGTAGGTACAGGGTCTTCTAGGTCTAGGAGATCTTCCAATCTCCATTTTAACCCGCTGGTTATTTCCTTATGTTTTAAGGTTTTTGGGATTGATGCACTTACCTTTTCTGGGTTTACTACCTTTAACTCTCTCCATATAAACTGTGGTGGTCTAGCAGAGAATAGCACTAAAGGTATAATATATGTTGGCGATGTAGATCCATCAGGACCATCAACATCTAAAGAGGTTGGAGAAAACTGGGCATTTAGCAACACCGGTCACTTCTTGAATAACGATGCATCAGAGACCTATATCCAAGAAACAAATACAACTAAGCTTTCTATGCCTGATTATGCTTTGTACCAAACCGCACGCGTGTCCCCCATTTCTCTCACTTACTATGGATTTTGTCTGCAAAATGGAGACTACACAGTATTGCTCCATTTTGCAGAGATCATGTTCACTGATGATCACACATATATGAGCCTAGGGAGGCGTATATTTGATGTTTATATTCAGGGAGAGCGGGTATTGAAGGATTTTAATATTGCAAATGAAGCAGGAGGAGTTGGAAAGGAAAAAATTAAAGAATTTCGTGCTCATGTGGGTAATAACTCCTTAGAAATCCGATTTTATTGGGCTGGAAAAGGGACAACTGCTATCCCATATAGTTCAGTATATGGCCCTCTTATATCAGCTATATCAGTCACTCAAGTCTCTAAAGGTGGCAGCCTGTCTACAGGGGTTATTGTTGGAATAGTAGTTTCTGCAATTGTTCTTGTCCTCCTAATTGCACATTTATTGAAAGAGAAAGGTAACCTAATAGAGCTAGTTGATAGAAAGTTAGGTTCAGATTTCAATGAAGATGAGGTGATGATGATGATCAAAGTGGCTCTTCTATGCACCAATTCCACTTCAAACCTTAGGCCAACAATGTCATCGGTGCTTAGTATGCTAGAAGGAAAAACTATGATTCCAGAATTTATTTCGGATCCATCCGAGGTAATGGATGAAATGAAGTTAGAGACAATGAGACAATATTACTATCAAATAGAAGAAAATGAGATAAGTGAGACACAAATCACACAAAGTCGTAGTTTATCATCAATTGATCATGAGCCATTGACAGCTTCATCTTCATCGGCTGCAGATTTATATCCTGTCAACATTGATACTTCCTATTGGGAGAAAAGAAATTAG 1368 0.3845 MVGSVLIPPKFKLFGMEKLDRSTDLLAILGKGDSGNLKELVLIKGVKLTSTAPELYFTMLSSMVGTGSSRSRRSSNLHFNPLVISLCFKVFGIDALTFSGFTTFNSLHINCGGLAENSTKGIIYVGDVDPSGPSTSKEVGENWAFSNTGHFLNNDASETYIQETNTTKLSMPDYALYQTARVSPISLTYYGFCLQNGDYTVLLHFAEIMFTDDHTYMSLGRRIFDVYIQGERVLKDFNIANEAGGVGKEKIKEFRAHVGNNSLEIRFYWAGKGTTAIPYSSVYGPLISAISVTQVSKGGSLSTGVIVGIVVSAIVLVLLIAHLLKEKGNLIELVDRKLGSDFNEDEVMMMIKVALLCTNSTSNLRPTMSSVLSMLEGKTMIPEFISDPSEVMDEMKLETMRQYYYQIEENEISETQITQSRSLSSIDHEPLTASSSSAADLYPVNIDTSYWEKRN 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0487 455 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 327 417 - -
Aed1g0487 455 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 79 256 - -
Aed1g0487 455 PANTHER PUTATIVE-RELATED 327 417 - -
Aed1g0487 455 PANTHER PUTATIVE-RELATED 79 256 - -
Aed1g0487 455 Pfam Malectin domain 106 290 IPR021720 -
Aed1g0487 455 Gene3D Transferase(Phosphotransferase) domain 1 310 391 - -
Aed1g0487 455 Gene3D - 105 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0487 Aed-Chr1 6557340 6563754 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0487 315 440 Receptor kinase-like Gene Family AT1G07650 46.032 3.86e-25 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0487 - - gmx:100785451 303.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0487 1 6557340 6563754 Aed1g0487 1 6557340 6563754 ECH