Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0480 ATGGGTGATGTCGGACGAGGTTTCTCTTCTCGTCTGCACATTTTCCTCTTCATTCTTGTGTTAGTGTTGTTTTCATCATCGTCGAAAGTGAGAGGAGGAAATGGTTCTTCTTGCGATGTGTTCACGGGAACATGGGTGGCGGACGAATCGTACCCGCTCTATGATCCCGCCACGTGTCCATTCGTCGAGCGCGAGTTCAGCTGCGAATTGAATGGACGCCCTGATCTGAACTACACCCACTATAGATGGCACCCACTTGCCTGCAACTTACTCAGTCCCCTCGAATGCACCGAAAATGAAGAGAACTTGAACTGGAAAGTGAAATTTAACGGGGTAGATTTTCTGGAGAAGATGAGAGGGAAGAGCATCATGTTCGTGGGAGATTCGCTGAGCAGGAATCAATGGAAATCCTTGACTTGCTTGCTTCATTCAGCAGTGCCCAATTCACCTTATACTGTGGATAGAGTTGGAGATGTTTCTATTTTCACATTAAAGGGGCAAGAATGGTGGTCTAAGAAATTGTTTGTAATGCAACCCATAAGGGATGGACAACGTGGGATAAGGTGCAAATGTTCAATGGAGTATGGGGTTAAAGTGATGCTAAATAGGAACGTGTATCTAGTTGACATAGTGAAACAGAATGATGTAGGGAGGGTCTTGAAGCTTGATTCAATAGAAGGAGGCAAGTGGGATTATGTTGAAGTGGGAGGTCATCTTTATAAAGATATAGATAGGATGAAGGCTTTTGAAATAGCACTTAAGACGTGGGGTGCATGGGTAGACGCCAACGTCGACCCTATGAAAGTGAAAGTCTTCTTTCAAGGAATTTCCCCATCTCACTACCAGTAA 849 0.4476 MGDVGRGFSSRLHIFLFILVLVLFSSSSKVRGGNGSSCDVFTGTWVADESYPLYDPATCPFVEREFSCELNGRPDLNYTHYRWHPLACNLLSPLECTENEENLNWKVKFNGVDFLEKMRGKSIMFVGDSLSRNQWKSLTCLLHSAVPNSPYTVDRVGDVSIFTLKGQEWWSKKLFVMQPIRDGQRGIRCKCSMEYGVKVMLNRNVYLVDIVKQNDVGRVLKLDSIEGGKWDYVEVGGHLYKDIDRMKAFEIALKTWGAWVDANVDPMKVKVFFQGISPSHYQ 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0480 282 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 18 165 IPR029962 GO:0016413
Aed1g0480 282 Pfam PMR5 N terminal Domain 37 89 IPR025846 -
Aed1g0480 282 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 41 18 165 - -
Aed1g0480 282 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 41 229 281 - -
Aed1g0480 282 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 186 229 IPR029962 GO:0016413
Aed1g0480 282 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 41 186 229 - -
Aed1g0480 282 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 229 281 IPR029962 GO:0016413
Aed1g0480 282 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 108 226 IPR026057 GO:0016740
Aed1g0480 282 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 229 282 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0480 Aed-Chr1 6522140 6525082 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0480 - - gsj:114377931 341.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0480 1 6522140 6525082 Aed1g0480 1 6522140 6525082 ECH