Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0442 ATGGCTAATGTGCCCCTTCTCCTCCTTTTCATTGTGTTCTTGTCTCTCTCCTCAGGAGGGAAACTGATCATGGTTAATGGACAGAAAACATGGTGTGTGGCAAAGCCTTCATCAGATCAAGCAACCCTTTTGGCCAACCTCAACTATGCTTGCTCTCAAGTTGATTGCAGGGTTCTGCAGAAAGGATGCCCCTGCTCTTACCCTGACAATCTCATGAACCATGCTTCCATAGCCATGAATCTCTATTACCAAACTAGGGGGAAAAACCACTGGAATTGTGATTTCAGAGCCTCTGGTCTTGTTGTTGTCACTGATCCAAGTTATGGTAACTGCATTTATGCAAACTAA 348 0.4454 MANVPLLLLFIVFLSLSSGGKLIMVNGQKTWCVAKPSSDQATLLANLNYACSQVDCRVLQKGCPCSYPDNLMNHASIAMNLYYQTRGKNHWNCDFRASGLVVVTDPSYGNCIYAN 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0442 115 Gene3D - 24 112 - -
Aed1g0442 115 SMART X8_cls 30 113 IPR012946 -
Aed1g0442 115 Pfam X8 domain 30 98 IPR012946 -
Aed1g0442 115 PANTHER BETA-1,3 GLUCANASE 7 114 IPR044788 -
Aed1g0442 115 PANTHER MAJOR POLLEN ALLERGEN OLE E 10-LIKE 7 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0442 Aed-Chr1 6139265 6140916 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0442 18 111 Glycoside Hydrolase AT2G05790 42.708 3.40e-19 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0442 - - gmx:100784427 219.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0442 1 6139265 6140916 Aed1g0442 1 6139265 6140916 ECH