Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1956 ATGAGTTTGGACTCGTCACGCTCAGGTAACTCTAAACGAAGTTTCTCTAGTTCTATATCGCCCAACCGTTCCAACGGTAGCAGTAACAGTAACAGCAAGAAGAAAAATAAGAAGACAGCCCCCAACCAGAAAACCCTAGGCGCTGCTTGGGGCTCTAAGTCAAATTCTCTGTCCTCCTCCCGAAAACCCGCCTTCTCCGATTTCGGCAGTTATATGACCGAGAAGAATCGGAAATTACACAACCAGTTTGACGCTGAGGCTTCCACCTCATCTTTGACTTTAAGTGGCTCTAGTTCTGGAAAGCCTATATTCAGTGGAGTTTCAATCTTTGTTGATGGTTTCACGATTCCTTCCAACCAGGAACTGCGGAGCTACATGCTAAAGTATGGTGGAAGATTTGAGAACTATTTCTCAAGACATCGTGTAACACATATCATTTGCAGTAATCTGCCTGATAGTAAAGTTAAGAACCTCAGAGCCTTCAGTGCAGGGTTGCCAGTGGTGAAACCCACTTGGATTTTAGATTCTGTTGCTGCTAATAGACTCTTGAGCTGGGTGCCTTATCAACTTGACCAGCTTGCTAATAACCAACAAAAACTGTCAGCATTCTTCACATTGAAAAGTAGTAAAATGTCAGAGGATGCTTTTACAAATGCCCTTTGTCAAGTTGTATCAGATGTTGAAGATTCATCCATGAGGGTTGGCCACTCAGATTCAGATGATAGACACTCATCCAAAGTTGGAGATATGAGTGAACTTAGTGGGCAAATCAGTACTGAATCTGATGATACTGTCCCTGAGAAAACTAATGCAATTATGATGGAAGAGCTGACTAGTGTTAGAGTTAAATGTGATGAAGAAGAGGATGCAGGAGGAAGCAATGCTGCTACTAAAGATGAGAGGAATATCGAAGGTGAACTTGAAACCACCCATCCAGCACCTTCTACATCATTTAGTACTCAGTGCTCAGATGAGCTGAATCTAAATCAACTTCCAAGTTCTTCAGGCACTAAGTCTTCTAAACAGTGTCATTCAACTCTTGCAGACCCTAATTTTGTGGAAAATTATTTCAAGAGCTCACGTCTACATTTTATAGGAACCTGGCGAAATCGGTATCGAAAGCGTTTTTCCACCGTGTCTACTGGACTTAACAATGGAAATTCTAATATCAGTGCCTCTGATATTTCTCATAATTCAGTCATTATCCATGTTGACATGGACTGCTTTTTTGTCTCAGTTGTTATCAGGAACCACCCTGAATTGTTGGACCAGCCTGTAGCTGTATGTCATTCAAATAATTCAAATGGAACTGCTGAGATTTCCTCTGCGAACTACCTGGCTCGTAGTCATGGTATTAGGGCTGGCATGTTTGTTCGTGATGCCAAGGCACTTTGTCCCCACCTTGTTATCTTTCCATACAACTTTGAAGCTTATGAGGAAGTAGCGGATCAATTTTATAGTATATTGCATCAGCGTTGCAACAAAGTGCAGGCTGTAAGCTGTGATGAAGCGTTTTTGGATGTCACAGATTCAGAGGTTGAAGATCCTGAACTTTTAGCTTCATCAATTAGAGAAGAGATCTATAAGACCACTGGATGTACAGCTAGTGCTGGTATAGCTGGAAATATGCTTATGGCTCGTATTGCTACTAGAACTGCAAAACCGAATGGTCAATATCACATAACTACAGAAAAAGTTGAAGATCATTTATGTCAACTCCCAATTAATGTACTTCCTGGAATAGGATATGTTTTACAGGAGAAGTTGAAGAAACAGAATGTTCACACATGTGGACAATTACGCCTTATTTCCAAGGCCTCATTGCAGAAGGACTATGGTATGAAAACAGGAGAAATGCTGTGGAATTATAGCAGAGGAATTGATAACCGGTTAGTTGGGGTCTTTCAGGATAGTAAGTCTGTTGGGGCTGATGTAAATTGGGGTGTGAGATTCAAAGATATAAAAGATTGCGAACACTTCCTGATAAACCTTTCCAAGGAGGTCTCATTACGATTGCAAGGTTGTGGAGTGCAGGGACGCACTTTCACTCTTAAGATAAAAAAGAGAAGAAAAGATGCTGATGAACCTGCAAAGTTTATGGGCTGTGGGGACTGTGAAAATTTGAGTCACTCTGTAACGATTCCTCTTGCTACTGATAATGTGGACATACTCCAAAGAATAGTAAAGCAGTTGTTTGGATGTTTTTACATAGCCTTGACTTGTAGCAGGGTATCCATATATGTTCAGTACAGATTTAATTGGATGTCAAGGAGATTCGAGGTATTGGCTTGCATGTTTCCAGACTTGAAAGTGCAGAAGCTTCTAAACAAGGTGTCTCTGTTGTTCACAGTGAAGCTTAACCAGCTGGGCTCAAAATATACTTTGAAATCGTGGCTCACTTCAGGATATGCAAGTATTAAAAATCAGAAATATCCTATGGGTCATGACAAGCAGAACAGGGATAGCTCTTCCAGTCGTGCTTGTAGAGATTTGCCAGGGTCTTCAGTTGAAATGGACAATAAAATGCCAAGTAACCAAGCTAGCACCAACCTAATTTCAACTCCCCCTCCTTTATGTAACCTTGACATGGAAGTTATATGGAATCTTCCCCCAGAAGTATTTTCAGAATTAAATGAAATTTATGGAGGGAAGTTAATTGATTATATTGCCAACAAGAAAAATACAAGTGAGTGTTCTAGCCCTTTAAGCAACTCATTTTTGCAGCAAGCAATAAACAAGGAAGAGGAACTTTCTTATTCTGAGCCGATTCCTCAAAACAATCCATTATCAAAAAATAAGGCAAAGCAGTATGAGGCGGACACAGGTGAAGGTGAAACAGTACCATATTCAGTGTGTAGACCATATTACAAGGATACTCACCATTCAAGTTTTGAAAAAGATGATTTATTGCCTTCTTCTTTTAGTCAAGTTGATGGTTCAGTGTTTCAACAATTGCCTGAGGATTTGAAAGCTGTCATTGTTGAGCAGCTTCCTGCACACAGGAGGCCAGAGAGTTGCTCCAATGTTGTTGTGGTCCCTCCGCTTGAAAACCATTCATTGTCAGTAGGTGTTGAAATTTCTGAGAATTTTCCTAGATCAAGTTATCATGACAATCTATGGGCTGGGAATCCCCCAAATTGGGTTGGGAAGTTCAAAGTTAGCAGTTGCTTAATGTTAAAGAAACTTGCAGAAATGTATTACAAATCAGGGTTGACTAGCACATTATCTTCAGTTTTGCACCAAATTATATCTGAATTCTATGAGCTAAATATGGCCCAGCAGTTTTCTGATGAAACTGTTAACATTATGTGTGAGCTACTGAGGCAGTATATCAAAGTGAAGATAGAAAGAGATATTGAAGAGATTTATATTTGTTTTCGGCTTCTGAAAAGGTTTGCAGCTAAGTCCCAGCTTTTCCTACAAGTATATAATAGCATATGTCCTTACCTTCAGGTACCTGTAAACAGAGATCATTTGTCAGCACAATCTGAGCAGATATTTCTAGATGCTGCAAGCAGCAAGCCTGGATTGTTTTGA 3537 0.4018 MSLDSSRSGNSKRSFSSSISPNRSNGSSNSNSKKKNKKTAPNQKTLGAAWGSKSNSLSSSRKPAFSDFGSYMTEKNRKLHNQFDAEASTSSLTLSGSSSGKPIFSGVSIFVDGFTIPSNQELRSYMLKYGGRFENYFSRHRVTHIICSNLPDSKVKNLRAFSAGLPVVKPTWILDSVAANRLLSWVPYQLDQLANNQQKLSAFFTLKSSKMSEDAFTNALCQVVSDVEDSSMRVGHSDSDDRHSSKVGDMSELSGQISTESDDTVPEKTNAIMMEELTSVRVKCDEEEDAGGSNAATKDERNIEGELETTHPAPSTSFSTQCSDELNLNQLPSSSGTKSSKQCHSTLADPNFVENYFKSSRLHFIGTWRNRYRKRFSTVSTGLNNGNSNISASDISHNSVIIHVDMDCFFVSVVIRNHPELLDQPVAVCHSNNSNGTAEISSANYLARSHGIRAGMFVRDAKALCPHLVIFPYNFEAYEEVADQFYSILHQRCNKVQAVSCDEAFLDVTDSEVEDPELLASSIREEIYKTTGCTASAGIAGNMLMARIATRTAKPNGQYHITTEKVEDHLCQLPINVLPGIGYVLQEKLKKQNVHTCGQLRLISKASLQKDYGMKTGEMLWNYSRGIDNRLVGVFQDSKSVGADVNWGVRFKDIKDCEHFLINLSKEVSLRLQGCGVQGRTFTLKIKKRRKDADEPAKFMGCGDCENLSHSVTIPLATDNVDILQRIVKQLFGCFYIALTCSRVSIYVQYRFNWMSRRFEVLACMFPDLKVQKLLNKVSLLFTVKLNQLGSKYTLKSWLTSGYASIKNQKYPMGHDKQNRDSSSSRACRDLPGSSVEMDNKMPSNQASTNLISTPPPLCNLDMEVIWNLPPEVFSELNEIYGGKLIDYIANKKNTSECSSPLSNSFLQQAINKEEELSYSEPIPQNNPLSKNKAKQYEADTGEGETVPYSVCRPYYKDTHHSSFEKDDLLPSSFSQVDGSVFQQLPEDLKAVIVEQLPAHRRPESCSNVVVVPPLENHSLSVGVEISENFPRSSYHDNLWAGNPPNWVGKFKVSSCLMLKKLAEMYYKSGLTSTLSSVLHQIISEFYELNMAQQFSDETVNIMCELLRQYIKVKIERDIEEIYICFRLLKRFAAKSQLFLQVYNSICPYLQVPVNRDHLSAQSEQIFLDAASSKPGLF 1178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1956 1178 MobiDBLite consensus disorder prediction 1 62 - -
Aed11g1956 1178 Gene3D - 418 472 - -
Aed11g1956 1178 Gene3D - 573 627 - -
Aed11g1956 1178 MobiDBLite consensus disorder prediction 838 853 - -
Aed11g1956 1178 ProSiteProfiles UmuC domain profile. 401 582 IPR001126 GO:0006281
Aed11g1956 1178 Pfam impB/mucB/samB family 404 550 IPR001126 GO:0006281
Aed11g1956 1178 SMART BRCT_7 101 180 IPR001357 -
Aed11g1956 1178 CDD PolY_Rev1 352 743 - -
Aed11g1956 1178 Pfam impB/mucB/samB family C-terminal domain 638 735 IPR017961 GO:0003684|GO:0006281
Aed11g1956 1178 MobiDBLite consensus disorder prediction 249 266 - -
Aed11g1956 1178 Pfam BRCT domain, a BRCA1 C-terminus domain 101 188 IPR001357 -
Aed11g1956 1178 PANTHER DNA REPAIR PROTEIN REV1 37 1154 - -
Aed11g1956 1178 Gene3D - 350 381 - -
Aed11g1956 1178 SUPERFAMILY Lesion bypass DNA polymerase (Y-family), little finger domain 638 737 IPR036775 GO:0003684|GO:0006281
Aed11g1956 1178 MobiDBLite consensus disorder prediction 231 268 - -
Aed11g1956 1178 CDD BRCT_Rev1 103 190 - -
Aed11g1956 1178 SUPERFAMILY DNA/RNA polymerases 395 632 IPR043502 -
Aed11g1956 1178 MobiDBLite consensus disorder prediction 231 248 - -
Aed11g1956 1178 ProSiteProfiles BRCT domain profile. 99 190 IPR001357 -
Aed11g1956 1178 SUPERFAMILY BRCT domain 70 192 IPR036420 -
Aed11g1956 1178 Gene3D - 401 562 IPR043128 -
Aed11g1956 1178 MobiDBLite consensus disorder prediction 810 853 - -
Aed11g1956 1178 Gene3D BRCT domain 95 190 IPR036420 -
Aed11g1956 1178 Gene3D - 637 751 IPR036775 GO:0003684|GO:0006281
Aed11g1956 1178 PIRSF REV1 771 1168 IPR012112 GO:0003684|GO:0006281|GO:0016779|GO:0042276
Aed11g1956 1178 PIRSF REV1 16 738 IPR012112 GO:0003684|GO:0006281|GO:0016779|GO:0042276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1956 K03515 - gmx:100778409 1903.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1956 11 22256717 22268544 Aed11g1956 11 22256717 22268544 ECH