Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1951 ATGGCTTCCTCTTCTTCTGCGGCGGAAGGTGTAGGTGTAGGTTTAGAAGAAGAAGAAGGGTCTGAATCGGGATGGGTGGATGCTCGAAGTTGGTGCGATCACCTGGGTTCCTTATCCGTGGATCTGAACAACATTCCGGCACCTGATACTCCCTGCAACACCTGTGAACACCCCAGTGAAAACTGGTTATGCCTCTCGTGTAAGCAGGTCCTCTGTAGCCGTTTTGTTAACAAGCACATGCTCCGCCATTTTGGGGACACAAATCACATTCACTGCGTCGCCCTCAGTTTCAGTGATCTCTCCGTCTGGTGTTTCTCCTGCGACGCTTACTTGGATCATCAACTCATTCCCCAACTGCGTCCTGTTCATCATCTCGCCTATATTTTGAAATTCGGCCAGCCTCCACCAATTCAATTTCAACCTCCTTCTTCTTCAACTTGA 441 0.4943 MASSSSAAEGVGVGLEEEEGSESGWVDARSWCDHLGSLSVDLNNIPAPDTPCNTCEHPSENWLCLSCKQVLCSRFVNKHMLRHFGDTNHIHCVALSFSDLSVWCFSCDAYLDHQLIPQLRPVHHLAYILKFGQPPPIQFQPPSSST 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1951 146 PANTHER HISTONE DEACETYLASE-LIKE PROTEIN 2 137 - -
Aed11g1951 146 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 26 134 IPR013083 -
Aed11g1951 146 MobiDBLite consensus disorder prediction 1 22 - -
Aed11g1951 146 Pfam Zn-finger in ubiquitin-hydrolases and other protein 52 114 IPR001607 GO:0008270
Aed11g1951 146 ProSiteProfiles Zinc finger UBP-type profile. 30 132 IPR001607 GO:0008270
Aed11g1951 146 SUPERFAMILY RING/U-box 30 124 - -
Aed11g1951 146 SMART Zf_UBP_1 51 102 IPR001607 GO:0008270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1951 - - gmx:100305878 217.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1951 11 22236403 22240601 Aed11g1951 11 22236403 22240601 ECH