Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1946 ATGGAGATGGAGGGAGTGGGGACCGAAACCGAAACTGAAACCGAAACCGAAACGAATAACGAGGAAGACGATCGTCCATGGCAATCTTACCACACTGTTTATACTACCGCCAAAGCAGGAATGGAAGGGGTTGACAAGGAGAAAGTTCAAAGGGTAGTTTACGAAATGAGCAAAGGATCCAAATATTTTCAAAACGAGGAACGCAAGGAAGCTTTTATTAAACAGAAAATCGACAACCTGCGAATTCAGTGTGTAAAGCTGACACAATCAGACATGGCCCATTATGAGAAGGTCGCTGATAGAAGAATTGTTGAGCTAGAAGCTTCGCGTGACCTTTCAAGGATTTGGTTACATGTTGATATGGATGCTTTCTATGCTGCAGTTGAGACTTTAAGTAACCCTACATTAATGGGCAAGCCAATAGCCGTTGGGACCATGTCCATGATATCCACTGCCAATTATGAGGCCCGCAAATTTGGGGTTCGAGCTGCCATGCCTGGGTTCATTGCACGTAAGCTATGTCCAGAATTAATCTTTGTCCCTACAGATTTCAAAAAGTATACTTATTACAGTGATTTGACCAGAAAAGTTTTTCGGAGGTATGATCCCAATTTCATTGCTGGTAGCCTGGATGAAGCATACCTTGATATAACTGAAGTTTGCAGAGAAAGGAATGTCAAAAGGGAAGAAATTGCCCAAGAACTCAGAGCTGGTGTTTATGAAGAGACTGGTCTCACATGCAGTGCTGGAGTGGCACCAAATCGCTTACTTGCTAAGGTTTGTTCAGACATAAACAAGCCAAATGGACAGTATCTTTTGCCAAATGACCGCATGGCTGTTATGACCTTTGTATCCTCCCTTCCTATCAGAAAGATTGGGGGTATTGGTAAAGTCACTGAAAATATTTTGAAGGGAGTTTTTGGAATTAACACATGTGAGCAGATGCTGGAGAAGAGTAGCTACCTTTATGCACTTTTCTCTCAGTCAACAGCAGAATTTTTTTGCTCTGTAGGTTTAGGTCTTGGGCAGACAGATTCTCCCCAAGTAAGATTTCGGAAAAGTATTAGTAATGAAAGAACATTTTCTGCCACCAAGGATGAAGTGCTGTTGCATAAAAAATTGGAGGAGCTTGCTGAGATGCTATCAGCCGACATGCAAAAAGAGGGTCTGTCTGGGCGAACATTGACTCTTAAATTAAAAACTGCTTCTTTTGAGGTTCGAACTAGAGCTGTGACATTACAGAAGTACATCAGCTCAAGTGAGGATATTTTGAAGCATGCTAAAAAGTTGCTACAAGCTGAACTTCCTATTTCAGTAAGATTGATAGAACTGCCTCCAAGTTTTGTTGAGGAAAGATTGGAGCACTCTGATTTTCATCTTGCTGAAAAGCTTCAAAAGGAAGAATCTAGGATTCCCCAAACATCTGTTCCGAGACAAAGCAAACCCAAGAAGCAAAAGTTGTCGCACAAAGAAGGCAGTTATACACCCATTGATTATTTTTTTGTTAAAAAGTAA 1515 0.4125 MEMEGVGTETETETETETNNEEDDRPWQSYHTVYTTAKAGMEGVDKEKVQRVVYEMSKGSKYFQNEERKEAFIKQKIDNLRIQCVKLTQSDMAHYEKVADRRIVELEASRDLSRIWLHVDMDAFYAAVETLSNPTLMGKPIAVGTMSMISTANYEARKFGVRAAMPGFIARKLCPELIFVPTDFKKYTYYSDLTRKVFRRYDPNFIAGSLDEAYLDITEVCRERNVKREEIAQELRAGVYEETGLTCSAGVAPNRLLAKVCSDINKPNGQYLLPNDRMAVMTFVSSLPIRKIGGIGKVTENILKGVFGINTCEQMLEKSSYLYALFSQSTAEFFCSVGLGLGQTDSPQVRFRKSISNERTFSATKDEVLLHKKLEELAEMLSADMQKEGLSGRTLTLKLKTASFEVRTRAVTLQKYISSSEDILKHAKKLLQAELPISVRLIELPPSFVEERLEHSDFHLAEKLQKEESRIPQTSVPRQSKPKKQKLSHKEGSYTPIDYFFVKK 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1946 504 MobiDBLite consensus disorder prediction 464 491 - -
Aed11g1946 504 Gene3D - 133 181 - -
Aed11g1946 504 Gene3D - 121 271 IPR043128 -
Aed11g1946 504 Gene3D - 272 345 - -
Aed11g1946 504 SUPERFAMILY Lesion bypass DNA polymerase (Y-family), little finger domain 350 442 IPR036775 GO:0003684|GO:0006281
Aed11g1946 504 CDD PolY_Pol_IV_kappa 117 442 IPR022880 GO:0003887
Aed11g1946 504 MobiDBLite consensus disorder prediction 1 20 - -
Aed11g1946 504 Gene3D - 350 452 IPR036775 GO:0003684|GO:0006281
Aed11g1946 504 PANTHER DNA POLYMERASE KAPPA 20 442 - -
Aed11g1946 504 Pfam impB/mucB/samB family C-terminal domain 352 442 IPR017961 GO:0003684|GO:0006281
Aed11g1946 504 MobiDBLite consensus disorder prediction 1 28 - -
Aed11g1946 504 Hamap DNA polymerase IV [dinB]. 113 455 IPR022880 GO:0003887
Aed11g1946 504 PANTHER DNA POLYMERASE KAPPA 442 486 - -
Aed11g1946 504 Coils Coil 63 83 - -
Aed11g1946 504 Pfam impB/mucB/samB family 119 263 IPR001126 GO:0006281
Aed11g1946 504 Gene3D - 34 120 - -
Aed11g1946 504 SUPERFAMILY DNA/RNA polymerases 90 343 IPR043502 -
Aed11g1946 504 ProSiteProfiles UmuC domain profile. 116 296 IPR001126 GO:0006281
Aed11g1946 504 PANTHER DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER 442 486 - -
Aed11g1946 504 PANTHER DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER 20 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1946 Aed-Chr11 22210301 22214435 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1946 K03511 - gmx:100816973 794.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1946 11 22210301 22214435 Aed11g1946 11 22210301 22214435 ECH