Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1792 ATGAAACTGAAACATGAAGAATCATCATCGTCTTCATCACCCATCAAATTCCAAATGTCCAGGCATCACTGCAATACCAGCATTTTTGGCCTCTCTTTCTCCTTCATTTTCTCCCTATGGTGTCTCCTCTTCTTCTACATCAAGCTTCGCCTCGTTCATGGCACTGGAGCTATGATAGAGCTCAATGAACCAGGTAGCTTCAACAACAGTCGTAGTCCGAAACATGCAAGGCTTCCTGAAACAACTAGTTTAGAACAAGTGTTTTGGCACGTTTTAGGTAATGGTAGTAATTTGGTGTGCAAACTACAACCTCCACAAGAGGAAAACAAACTTAAACAAAATCCTGATGAATTTCGAAACATAGAAGCAGCCCAAGAAAAAACAAAGGGCATGAACTCTGAGCTTGTTAACATAACTCACAGGCTTGAATCTGATGGTTCTGTGTACAACTATGCCTCTGAGTTCAAAGGTGCAAAGGTCGTGGCCCACAATAAGGAGGCCAACGGTGCTAAAAATATACTCGGGAAGGATCATGACAAGTACCTGAGAAACCCTTGTTCTGTTGAAGGAAAATTTGTTGTTATTGAGCTTTCAGAAGAGACCCTGGTTGATTCTGTCAAGATTGCAAACTTTGAGCATTATTCTTCTAACTTCAAGGAATTTGATTTGGCTGGAAGTTTGAGCTATCCAACTGAAGAATGGAGCATGCTCGGAAACTTCATTGCTGCCAATGTCAAGCATGCACAGATCTTTAAGCTGCCTGAACCCAAATGGGCAAGGTATTTGAAGTTGAGCTTGATTAGTCATTATGGATCTGAGTTTTACTGCACACTGAGTGTTGTAGAAGTTTATGGTATCAATGCGATAGAACGAATGCTTAAGGATCTCATTGTTGCTTCTGTGGCATCCATTCCTGATAAGTTGCCTGTGCATAATATCAGTGACACCCCTTCTTTGAAATCAGAAGATGGTCAGATTGACAGAAATGGAAAAAAAGTTGATACTAAGAATGATACTGTGGCTGCTGAGATATCAAGCAACGATACCACTAGAGAGTTTGACGCAGAAGCGCTAAAAACAACGGTGACTGCGAACTTGATTCTGGATCCTGTATTAGAACTCAGACAGCAGCTAAATGGTAGGGTAGCTGGTGACACTGTTCTGAAGATTTTGATGCAGAAAGTGAAGTCAGTGGAGGTAAACTTATCTGCCCTTGAGGATTACATCAAGGAATTGAACAGGAGACAAGGGGTTAAAATACCGGATCTTGAGAAAGACTTGTCCAGATTTTCAGAAAGCCTTGAACAAAGCAAGTCAGAGATCAAAGATCTATGGCAGTGGAACACAAATATGGAAAAAGGAATATCTGAGGTCGAGTCTTGGAAAGATGCTGTCTCATCTCAGCTTAATGAATTAGCCAGAGAAAATAGCATGCTAAGATCAGATGTTCGGAAGGTTGCAAGTAATCAAGCAAATATGGAAACCAAAGAACTTGCTGTATTTGCAACGAGTCTTGTTTTTGTGTGCCTCGCAGTTCTCAAGATAGTTTCAGTACATATGATGACGTTTTCTGCATCATATAATGCAAATAAGGTGCGCCAGACAATTAGAGGATGGGTTACATTATTTGTATGCTGTAGTGTAACAATATTCATTATATTGTTTTATAGCTAG 1674 0.4038 MKLKHEESSSSSSPIKFQMSRHHCNTSIFGLSFSFIFSLWCLLFFYIKLRLVHGTGAMIELNEPGSFNNSRSPKHARLPETTSLEQVFWHVLGNGSNLVCKLQPPQEENKLKQNPDEFRNIEAAQEKTKGMNSELVNITHRLESDGSVYNYASEFKGAKVVAHNKEANGAKNILGKDHDKYLRNPCSVEGKFVVIELSEETLVDSVKIANFEHYSSNFKEFDLAGSLSYPTEEWSMLGNFIAANVKHAQIFKLPEPKWARYLKLSLISHYGSEFYCTLSVVEVYGINAIERMLKDLIVASVASIPDKLPVHNISDTPSLKSEDGQIDRNGKKVDTKNDTVAAEISSNDTTREFDAEALKTTVTANLILDPVLELRQQLNGRVAGDTVLKILMQKVKSVEVNLSALEDYIKELNRRQGVKIPDLEKDLSRFSESLEQSKSEIKDLWQWNTNMEKGISEVESWKDAVSSQLNELARENSMLRSDVRKVASNQANMETKELAVFATSLVFVCLAVLKIVSVHMMTFSASYNANKVRQTIRGWVTLFVCCSVTIFIILFYS 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1792 557 Pfam Sad1 / UNC-like C-terminal 163 285 IPR012919 -
Aed11g1792 557 ProSiteProfiles SUN domain profile. 128 288 IPR012919 -
Aed11g1792 557 Coils Coil 395 415 - -
Aed11g1792 557 Coils Coil 420 440 - -
Aed11g1792 557 SUPERFAMILY Galactose-binding domain-like 169 284 IPR008979 -
Aed11g1792 557 Gene3D - 147 296 - -
Aed11g1792 557 PANTHER MEMBRANE PROTEIN CH1 RELATED 68 557 IPR045120 GO:0016020
Aed11g1792 557 PANTHER SUN DOMAIN-CONTAINING PROTEIN 5 68 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1792 Aed-Chr11 21256878 21259396 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1792 - - gmx:102668828 955.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1792 11 21256878 21259396 Aed11g1792 11 21256878 21259396 ECH