Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1789 ATGTGCCTTGGCTTTGGCAGATCCATATTCCTCATTCATCTCTCCAACATGGCCAAACCCGAGAGCAGGACCAACTTGGCTTCGTGTTTCGTGGCCACCATTTTCTTGATCTTCATTCTCATCGTCGTCTTCATCGTTTACTTCACGGTGTTCAAGCCCCAGGACCCCAAAATCGCCGTCAGCGCCCTCCAGATCCCTTCCTTCTCCGTTACTAACGGCACCGTCAACTTCACGTTCTCCCAGTACGCCTCCGTCAGGAACCCTAACCGAGGCACCTTCTCCCACTACGACAGCTCCCTCCAGCTTCTCTATTACGGCAGACAGGTCGGCTTCATGTTCGTTCCCGCCGGTAAGATCGCCGCCAGCAGGACTCAGTACATGGCTGCCACGTTCACTGTTCAGTCATTACCGTTAGACCTGGGGCCCACCATGGAGATCGAGTCGAAGATAGAGATGGCGGGGCGCGTGAGGGTCTTGCACCTCTTCAGTCACCACGTGGAGGCAAAAGCTCAATGCAGGGTCGCCATCGCCATCACCGATGGATCCGTCTTAGGTTTTCGTTGCTAA 567 0.5485 MCLGFGRSIFLIHLSNMAKPESRTNLASCFVATIFLIFILIVVFIVYFTVFKPQDPKIAVSALQIPSFSVTNGTVNFTFSQYASVRNPNRGTFSHYDSSLQLLYYGRQVGFMFVPAGKIAASRTQYMAATFTVQSLPLDLGPTMEIESKIEMAGRVRVLHLFSHHVEAKAQCRVAIAITDGSVLGFRC 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1789 188 PANTHER LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN 18 188 - -
Aed11g1789 188 Pfam Late embryogenesis abundant protein 84 172 IPR004864 -
Aed11g1789 188 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 18 188 - -
Aed11g1789 188 SUPERFAMILY LEA14-like 36 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1789 Aed-Chr11 21249241 21249807 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1789 - - gmx:100820289 298.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1789 11 21249241 21249807 Aed11g1789 11 21249241 21249807 ECH
Aed11g1789 11 21249241 21249807 Aed5g2369 5 25211065 25211688 PCT