Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1771 ATGTTCAAAGGAAACGGAACTAACTGTGCTCGTATTGTTCCAAATTCAGCAGTAAAGTTCTTTAGCTATGAGCAAGCTACCATGGGTGTTTTGTGGTTCTATCAGCAGCAACCTGGAAATGAAGAAGCTCAGCTCACTCCTATTTTACGTCTTGGAGCTGGTGCATGCGCAGCAATCATTGCCATGTCTGCCACTTATCCAATGGACCTGGTGCGAGGAAGGCTAACTGTTCAGACAGAAGCATCTCCTTGTCAATACAGAGGAATTTTTCATGCTCTTTCAATAGTCTTCTCGGATGAAGGCCCTCGGGCTTTGTACAAAGGTTGGCTACCTTCAGTCATAGGAGTTATACCGTATGTAGGTCTAAATTTTGCAGTATATGAATCTCTCAAAGAGTGGTTGATTCAATCTAAACCACTTGAAATAGCTCAAGACTCTGAGCTAAGTGTGATGACAAGACTTGCATGTGGGGCTGCTGCAGGAACTGTTGGTCAGACTGTGGCTTATTCCCTTGATGTCATTCGTCGTAGAATGCAAATGGTGGGTTGGAAAGATGTTGCTTCAGTAGTTGCTGGTGAGGGAAAGAGCAGATTTGAGTATACTGGTATGGTTGATGCATTCAGGAAAACCGTACAGCATGAAGGATTTGGAGCATTATACAAGGGCCTAGTTCCCAATTCAGTCAAAGTAGTCCCTTCTATTGCTATTGCTTTTGTGACATGA 723 0.4357 MFKGNGTNCARIVPNSAVKFFSYEQATMGVLWFYQQQPGNEEAQLTPILRLGAGACAAIIAMSATYPMDLVRGRLTVQTEASPCQYRGIFHALSIVFSDEGPRALYKGWLPSVIGVIPYVGLNFAVYESLKEWLIQSKPLEIAQDSELSVMTRLACGAAAGTVGQTVAYSLDVIRRRMQMVGWKDVASVVAGEGKSRFEYTGMVDAFRKTVQHEGFGALYKGLVPNSVKVVPSIAIAFVT 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1771 240 PANTHER SOLUTE CARRIER FAMILY 25 1 240 - -
Aed11g1771 240 ProSiteProfiles Solute carrier (Solcar) repeat profile. 148 240 IPR018108 -
Aed11g1771 240 SUPERFAMILY Mitochondrial carrier 1 240 IPR023395 -
Aed11g1771 240 ProSiteProfiles Solute carrier (Solcar) repeat profile. 45 133 IPR018108 -
Aed11g1771 240 PRINTS Mitochondrial carrier protein signature 157 179 IPR002067 GO:0055085
Aed11g1771 240 PRINTS Mitochondrial carrier protein signature 4 24 IPR002067 GO:0055085
Aed11g1771 240 PRINTS Mitochondrial carrier protein signature 106 124 IPR002067 GO:0055085
Aed11g1771 240 PRINTS Mitochondrial carrier protein signature 60 78 IPR002067 GO:0055085
Aed11g1771 240 Pfam Mitochondrial carrier protein 147 240 IPR018108 -
Aed11g1771 240 Pfam Mitochondrial carrier protein 46 137 IPR018108 -
Aed11g1771 240 Gene3D Mitochondrial carrier domain 1 240 IPR023395 -
Aed11g1771 240 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 1 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1771 Aed-Chr11 21137285 21138492 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1771 1 239 EF-hand Containing Proteins AT5G51050 35.565 5.95e-45 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1771 K14684 - gmx:100787733 426.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1771 11 21137285 21138492 Aed11g1771 11 21137285 21138492 ECH